Hb_010172_040

Information

Type -
Description -
Location Contig10172: 47963-51413
Sequence    

Annotation

kegg
ID rcu:RCOM_1288540
description hypothetical protein
nr
ID XP_012072186.1
description PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
swissprot
ID Q9LYP4
description BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana GN=BAG3 PE=1 SV=1
trembl
ID A0A067KP74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04669 PE=4 SV=1
Gene Ontology
ID GO:0051087
description bag family molecular chaperone regulator 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00807: 47977-48612
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010172_040 0.0 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
2 Hb_002809_180 0.0521312569 - - PREDICTED: homeobox protein HD1 [Jatropha curcas]
3 Hb_000343_070 0.0633682465 - - hypothetical protein JCGZ_06265 [Jatropha curcas]
4 Hb_000421_040 0.0642225186 - - Peptide transporter, putative [Ricinus communis]
5 Hb_000172_270 0.0665156075 - - hypothetical protein JCGZ_24087 [Jatropha curcas]
6 Hb_000707_090 0.0696080115 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
7 Hb_001278_120 0.0706239066 - - PREDICTED: reticulon-like protein B14 [Jatropha curcas]
8 Hb_061700_010 0.0711397018 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
9 Hb_005269_060 0.0776007285 - - PREDICTED: rac-like GTP-binding protein RAC2 [Cicer arietinum]
10 Hb_061256_020 0.0791073621 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
11 Hb_001048_010 0.0802512738 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 7 [Jatropha curcas]
12 Hb_000392_350 0.0816328418 - - zinc finger protein, putative [Ricinus communis]
13 Hb_004459_010 0.0835933077 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
14 Hb_001289_040 0.0850647513 - - NDR1/HIN1-like 1 [Theobroma cacao]
15 Hb_000557_080 0.0858516978 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001140_290 0.0872541801 - - hypothetical protein JCGZ_26107 [Jatropha curcas]
17 Hb_003549_100 0.088100604 - - PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
18 Hb_004650_110 0.0881212786 - - hypothetical protein POPTR_0002s08760g [Populus trichocarpa]
19 Hb_108090_010 0.0896902094 - - conserved hypothetical protein [Ricinus communis]
20 Hb_011344_040 0.0942538782 - - PREDICTED: 21 kDa protein [Jatropha curcas]

Gene co-expression network

sample Hb_010172_040 Hb_010172_040 Hb_002809_180 Hb_002809_180 Hb_010172_040--Hb_002809_180 Hb_000343_070 Hb_000343_070 Hb_010172_040--Hb_000343_070 Hb_000421_040 Hb_000421_040 Hb_010172_040--Hb_000421_040 Hb_000172_270 Hb_000172_270 Hb_010172_040--Hb_000172_270 Hb_000707_090 Hb_000707_090 Hb_010172_040--Hb_000707_090 Hb_001278_120 Hb_001278_120 Hb_010172_040--Hb_001278_120 Hb_001397_020 Hb_001397_020 Hb_002809_180--Hb_001397_020 Hb_001140_290 Hb_001140_290 Hb_002809_180--Hb_001140_290 Hb_003549_100 Hb_003549_100 Hb_002809_180--Hb_003549_100 Hb_010589_010 Hb_010589_010 Hb_002809_180--Hb_010589_010 Hb_003152_020 Hb_003152_020 Hb_002809_180--Hb_003152_020 Hb_000343_070--Hb_001278_120 Hb_004943_020 Hb_004943_020 Hb_000343_070--Hb_004943_020 Hb_005269_060 Hb_005269_060 Hb_000343_070--Hb_005269_060 Hb_049955_010 Hb_049955_010 Hb_000343_070--Hb_049955_010 Hb_000343_070--Hb_000707_090 Hb_000421_040--Hb_000707_090 Hb_000557_080 Hb_000557_080 Hb_000421_040--Hb_000557_080 Hb_061700_010 Hb_061700_010 Hb_000421_040--Hb_061700_010 Hb_001289_040 Hb_001289_040 Hb_000421_040--Hb_001289_040 Hb_000421_040--Hb_000172_270 Hb_138977_010 Hb_138977_010 Hb_000172_270--Hb_138977_010 Hb_000172_270--Hb_061700_010 Hb_000172_270--Hb_001289_040 Hb_000172_270--Hb_002809_180 Hb_000707_090--Hb_000557_080 Hb_007382_110 Hb_007382_110 Hb_000707_090--Hb_007382_110 Hb_000707_090--Hb_001289_040 Hb_006895_010 Hb_006895_010 Hb_000707_090--Hb_006895_010 Hb_001278_120--Hb_004943_020 Hb_004459_010 Hb_004459_010 Hb_001278_120--Hb_004459_010 Hb_128986_010 Hb_128986_010 Hb_001278_120--Hb_128986_010 Hb_003855_060 Hb_003855_060 Hb_001278_120--Hb_003855_060 Hb_000326_120 Hb_000326_120 Hb_001278_120--Hb_000326_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.101037 0.630143 8.38853 35.2764 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.257376 27.4701

CAGE analysis