Hb_077027_010

Information

Type -
Description -
Location Contig77027: 3817-4065
Sequence    

Annotation

kegg
ID rcu:RCOM_1596370
description nutrient reservoir, putative
nr
ID KDP38586.1
description hypothetical protein JCGZ_04511 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQT9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04511 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_077027_010 0.0 - - hypothetical protein JCGZ_04511 [Jatropha curcas]
2 Hb_064396_020 0.0062088043 - - hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
3 Hb_094439_040 0.047438473 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
4 Hb_135737_010 0.0488971265 - - hypothetical protein POPTR_0004s02760g [Populus trichocarpa]
5 Hb_001289_040 0.0539233405 - - NDR1/HIN1-like 1 [Theobroma cacao]
6 Hb_000557_080 0.0568626619 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000392_500 0.084750812 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001097_170 0.0849866111 - - PREDICTED: protein NDR1 [Jatropha curcas]
9 Hb_061700_010 0.0889110716 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
10 Hb_000172_270 0.0889737324 - - hypothetical protein JCGZ_24087 [Jatropha curcas]
11 Hb_000111_060 0.0899286699 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 6 isoform X2 [Jatropha curcas]
12 Hb_142204_010 0.091467053 - - pyruvate decarboxylase [Saccharum officinarum]
13 Hb_000421_040 0.0928160124 - - Peptide transporter, putative [Ricinus communis]
14 Hb_006895_010 0.096084163 - - PREDICTED: secologanin synthase-like [Citrus sinensis]
15 Hb_000416_020 0.0967233873 - - conserved hypothetical protein [Ricinus communis]
16 Hb_152868_020 0.0968206021 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
17 Hb_000707_090 0.0974177408 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
18 Hb_026317_040 0.0975312037 - - hypothetical protein POPTR_0009s12270g [Populus trichocarpa]
19 Hb_010288_010 0.0981371521 - - Beta-glucosidase, putative [Ricinus communis]
20 Hb_000580_200 0.0990991774 - - PREDICTED: pectinesterase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_077027_010 Hb_077027_010 Hb_064396_020 Hb_064396_020 Hb_077027_010--Hb_064396_020 Hb_094439_040 Hb_094439_040 Hb_077027_010--Hb_094439_040 Hb_135737_010 Hb_135737_010 Hb_077027_010--Hb_135737_010 Hb_001289_040 Hb_001289_040 Hb_077027_010--Hb_001289_040 Hb_000557_080 Hb_000557_080 Hb_077027_010--Hb_000557_080 Hb_000392_500 Hb_000392_500 Hb_077027_010--Hb_000392_500 Hb_064396_020--Hb_135737_010 Hb_064396_020--Hb_094439_040 Hb_064396_020--Hb_000557_080 Hb_064396_020--Hb_001289_040 Hb_064396_020--Hb_000392_500 Hb_094439_040--Hb_001289_040 Hb_094439_040--Hb_000557_080 Hb_006895_010 Hb_006895_010 Hb_094439_040--Hb_006895_010 Hb_001097_170 Hb_001097_170 Hb_094439_040--Hb_001097_170 Hb_000111_060 Hb_000111_060 Hb_135737_010--Hb_000111_060 Hb_135737_010--Hb_000392_500 Hb_010288_010 Hb_010288_010 Hb_135737_010--Hb_010288_010 Hb_064445_040 Hb_064445_040 Hb_135737_010--Hb_064445_040 Hb_001289_040--Hb_000557_080 Hb_001289_040--Hb_006895_010 Hb_000421_040 Hb_000421_040 Hb_001289_040--Hb_000421_040 Hb_000707_090 Hb_000707_090 Hb_000557_080--Hb_000707_090 Hb_142204_010 Hb_142204_010 Hb_000557_080--Hb_142204_010 Hb_000007_190 Hb_000007_190 Hb_000392_500--Hb_000007_190 Hb_000392_500--Hb_064445_040 Hb_000392_500--Hb_010288_010 Hb_103225_040 Hb_103225_040 Hb_000392_500--Hb_103225_040 Hb_152868_020 Hb_152868_020 Hb_000392_500--Hb_152868_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.871193 6.56185 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 5.46728

CAGE analysis