Hb_064396_020

Information

Type -
Description -
Location Contig64396: 38654-39393
Sequence    

Annotation

kegg
ID pop:POPTR_0019s09950g
description POPTRDRAFT_836093; hypothetical protein
nr
ID XP_006371406.1
description hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
swissprot
ID Q93ZR6
description O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
trembl
ID U5FEN7
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s09950g PE=4 SV=1
Gene Ontology
ID GO:0004144
description o-acyltransferase wsd1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064396_020 0.0 - - hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
2 Hb_077027_010 0.0062088043 - - hypothetical protein JCGZ_04511 [Jatropha curcas]
3 Hb_135737_010 0.045624769 - - hypothetical protein POPTR_0004s02760g [Populus trichocarpa]
4 Hb_094439_040 0.0517942511 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
5 Hb_000557_080 0.0563786016 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001289_040 0.0571312113 - - NDR1/HIN1-like 1 [Theobroma cacao]
7 Hb_000392_500 0.0788288918 - - conserved hypothetical protein [Ricinus communis]
8 Hb_061700_010 0.086233235 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
9 Hb_142204_010 0.0871358686 - - pyruvate decarboxylase [Saccharum officinarum]
10 Hb_000111_060 0.0895851169 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 6 isoform X2 [Jatropha curcas]
11 Hb_001097_170 0.0898091638 - - PREDICTED: protein NDR1 [Jatropha curcas]
12 Hb_000172_270 0.0904652662 - - hypothetical protein JCGZ_24087 [Jatropha curcas]
13 Hb_152868_020 0.0908561627 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
14 Hb_000421_040 0.0931058637 - - Peptide transporter, putative [Ricinus communis]
15 Hb_010288_010 0.0932073693 - - Beta-glucosidase, putative [Ricinus communis]
16 Hb_000007_190 0.0960543731 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Jatropha curcas]
17 Hb_000707_090 0.0973343297 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
18 Hb_026317_040 0.097490724 - - hypothetical protein POPTR_0009s12270g [Populus trichocarpa]
19 Hb_000416_020 0.0976932926 - - conserved hypothetical protein [Ricinus communis]
20 Hb_006895_010 0.0992115415 - - PREDICTED: secologanin synthase-like [Citrus sinensis]

Gene co-expression network

sample Hb_064396_020 Hb_064396_020 Hb_077027_010 Hb_077027_010 Hb_064396_020--Hb_077027_010 Hb_135737_010 Hb_135737_010 Hb_064396_020--Hb_135737_010 Hb_094439_040 Hb_094439_040 Hb_064396_020--Hb_094439_040 Hb_000557_080 Hb_000557_080 Hb_064396_020--Hb_000557_080 Hb_001289_040 Hb_001289_040 Hb_064396_020--Hb_001289_040 Hb_000392_500 Hb_000392_500 Hb_064396_020--Hb_000392_500 Hb_077027_010--Hb_094439_040 Hb_077027_010--Hb_135737_010 Hb_077027_010--Hb_001289_040 Hb_077027_010--Hb_000557_080 Hb_077027_010--Hb_000392_500 Hb_000111_060 Hb_000111_060 Hb_135737_010--Hb_000111_060 Hb_135737_010--Hb_000392_500 Hb_010288_010 Hb_010288_010 Hb_135737_010--Hb_010288_010 Hb_064445_040 Hb_064445_040 Hb_135737_010--Hb_064445_040 Hb_094439_040--Hb_001289_040 Hb_094439_040--Hb_000557_080 Hb_006895_010 Hb_006895_010 Hb_094439_040--Hb_006895_010 Hb_001097_170 Hb_001097_170 Hb_094439_040--Hb_001097_170 Hb_000557_080--Hb_001289_040 Hb_000707_090 Hb_000707_090 Hb_000557_080--Hb_000707_090 Hb_142204_010 Hb_142204_010 Hb_000557_080--Hb_142204_010 Hb_001289_040--Hb_006895_010 Hb_000421_040 Hb_000421_040 Hb_001289_040--Hb_000421_040 Hb_000007_190 Hb_000007_190 Hb_000392_500--Hb_000007_190 Hb_000392_500--Hb_064445_040 Hb_000392_500--Hb_010288_010 Hb_103225_040 Hb_103225_040 Hb_000392_500--Hb_103225_040 Hb_152868_020 Hb_152868_020 Hb_000392_500--Hb_152868_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.17477 9.08596 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 7.34922

CAGE analysis