Hb_033883_060

Information

Type -
Description -
Location Contig33883: 25066-27345
Sequence    

Annotation

kegg
ID rcu:RCOM_1580150
description heat shock protein binding protein, putative
nr
ID XP_012090104.1
description PREDICTED: uncharacterized protein LOC105648353 [Jatropha curcas]
swissprot
ID Q28I38
description DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis GN=dnajb14 PE=2 SV=1
trembl
ID A0A067JEB4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25993 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35418: 22535-27678 , PASA_asmbl_35419: 22528-27672
cDNA
(Sanger)
(ID:Location)		 049_L11.ab1: 22528-25234

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033883_060 0.0 - - PREDICTED: uncharacterized protein LOC105648353 [Jatropha curcas]
2 Hb_031042_070 0.0434574182 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001633_040 0.060857559 - - PREDICTED: protein AUXIN SIGNALING F-BOX 2-like [Jatropha curcas]
4 Hb_004635_050 0.0644870615 - - nucleolar phosphoprotein, putative [Ricinus communis]
5 Hb_017075_030 0.0658357682 - - helicase, putative [Ricinus communis]
6 Hb_004920_130 0.0675751388 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
7 Hb_002659_060 0.0702800315 - - PREDICTED: SWI/SNF complex subunit SWI3B [Jatropha curcas]
8 Hb_030565_090 0.0720345251 - - PREDICTED: DNA repair protein RAD50 [Jatropha curcas]
9 Hb_000300_360 0.072374933 - - PREDICTED: exosome component 10 [Jatropha curcas]
10 Hb_003777_160 0.0740828305 transcription factor TF Family: bZIP PREDICTED: G-box-binding factor 4 isoform X1 [Jatropha curcas]
11 Hb_147737_010 0.0751271782 - - PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X2 [Jatropha curcas]
12 Hb_019153_020 0.0761773214 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
13 Hb_140049_020 0.0762487764 - - PREDICTED: cell division cycle protein 73 [Jatropha curcas]
14 Hb_010315_090 0.0767852674 - - suppressor of ty, putative [Ricinus communis]
15 Hb_007982_070 0.0785338435 - - PREDICTED: protein CPR-5 [Jatropha curcas]
16 Hb_000813_100 0.078958714 - - PREDICTED: uncharacterized protein LOC105631583 isoform X2 [Jatropha curcas]
17 Hb_000120_610 0.0796387512 - - mitotic control protein dis3, putative [Ricinus communis]
18 Hb_000002_040 0.0810443352 - - hypothetical protein JCGZ_01511 [Jatropha curcas]
19 Hb_007558_120 0.0831329637 transcription factor TF Family: IWS1 transcription elongation factor s-II, putative [Ricinus communis]
20 Hb_000264_100 0.0843439109 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_033883_060 Hb_033883_060 Hb_031042_070 Hb_031042_070 Hb_033883_060--Hb_031042_070 Hb_001633_040 Hb_001633_040 Hb_033883_060--Hb_001633_040 Hb_004635_050 Hb_004635_050 Hb_033883_060--Hb_004635_050 Hb_017075_030 Hb_017075_030 Hb_033883_060--Hb_017075_030 Hb_004920_130 Hb_004920_130 Hb_033883_060--Hb_004920_130 Hb_002659_060 Hb_002659_060 Hb_033883_060--Hb_002659_060 Hb_031042_070--Hb_001633_040 Hb_007982_070 Hb_007982_070 Hb_031042_070--Hb_007982_070 Hb_000300_360 Hb_000300_360 Hb_031042_070--Hb_000300_360 Hb_002163_010 Hb_002163_010 Hb_031042_070--Hb_002163_010 Hb_007632_020 Hb_007632_020 Hb_031042_070--Hb_007632_020 Hb_001633_040--Hb_000300_360 Hb_001633_040--Hb_007982_070 Hb_001633_040--Hb_002163_010 Hb_030565_090 Hb_030565_090 Hb_001633_040--Hb_030565_090 Hb_007943_120 Hb_007943_120 Hb_004635_050--Hb_007943_120 Hb_007558_120 Hb_007558_120 Hb_004635_050--Hb_007558_120 Hb_003777_160 Hb_003777_160 Hb_004635_050--Hb_003777_160 Hb_005883_010 Hb_005883_010 Hb_004635_050--Hb_005883_010 Hb_019153_020 Hb_019153_020 Hb_004635_050--Hb_019153_020 Hb_000406_240 Hb_000406_240 Hb_017075_030--Hb_000406_240 Hb_003106_150 Hb_003106_150 Hb_017075_030--Hb_003106_150 Hb_017075_030--Hb_031042_070 Hb_001946_300 Hb_001946_300 Hb_017075_030--Hb_001946_300 Hb_003878_140 Hb_003878_140 Hb_017075_030--Hb_003878_140 Hb_004920_130--Hb_002659_060 Hb_001157_180 Hb_001157_180 Hb_004920_130--Hb_001157_180 Hb_004920_130--Hb_031042_070 Hb_000813_100 Hb_000813_100 Hb_004920_130--Hb_000813_100 Hb_000821_010 Hb_000821_010 Hb_004920_130--Hb_000821_010 Hb_000120_610 Hb_000120_610 Hb_002659_060--Hb_000120_610 Hb_000594_020 Hb_000594_020 Hb_002659_060--Hb_000594_020 Hb_000504_160 Hb_000504_160 Hb_002659_060--Hb_000504_160 Hb_002659_060--Hb_004635_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
38.9685 32.0832 12.8619 8.98705 30.968 30.71
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.7494 8.11592 13.5107 17.1702 12.1276

CAGE analysis