Hb_004920_130

Information

Type transcription factor
Description TF Family: SET
Location Contig4920: 92444-100618
Sequence    

Annotation

kegg
ID rcu:RCOM_1347120
description enhancer of zeste, ezh, putative (EC:2.1.1.43)
nr
ID CBI36953.3
description unnamed protein product [Vitis vinifera]
swissprot
ID Q8S4P5
description Histone-lysine N-methyltransferase EZ2 OS=Zea mays GN=EZ2 PE=2 SV=1
trembl
ID B9RNE0
description Enhancer of zeste, ezh, putative OS=Ricinus communis GN=RCOM_1347120 PE=4 SV=1
Gene Ontology
ID GO:0005515
description enhancer of

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45344: 92617-100432 , PASA_asmbl_45345: 92617-100432 , PASA_asmbl_45346: 92617-97725 , PASA_asmbl_45347: 92444-100426 , PASA_asmbl_45348: 93503-94463 , PASA_asmbl_45349: 94778-96335 , PASA_asmbl_45350: 94070-94767 , PASA_asmbl_45351: 93503-93840
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004920_130 0.0 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
2 Hb_002659_060 0.0669413133 - - PREDICTED: SWI/SNF complex subunit SWI3B [Jatropha curcas]
3 Hb_033883_060 0.0675751388 - - PREDICTED: uncharacterized protein LOC105648353 [Jatropha curcas]
4 Hb_001157_180 0.0720740386 - - protein binding protein, putative [Ricinus communis]
5 Hb_031042_070 0.0748115457 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000813_100 0.0855891121 - - PREDICTED: uncharacterized protein LOC105631583 isoform X2 [Jatropha curcas]
7 Hb_000821_010 0.0898006507 - - PREDICTED: auxin response factor 19-like [Jatropha curcas]
8 Hb_000120_610 0.089821913 - - mitotic control protein dis3, putative [Ricinus communis]
9 Hb_030565_090 0.0916921363 - - PREDICTED: DNA repair protein RAD50 [Jatropha curcas]
10 Hb_000264_100 0.0930786679 - - conserved hypothetical protein [Ricinus communis]
11 Hb_017075_030 0.093195858 - - helicase, putative [Ricinus communis]
12 Hb_000594_020 0.093312836 - - PREDICTED: mediator of RNA polymerase II transcription subunit 25 isoform X2 [Jatropha curcas]
13 Hb_001633_040 0.0933943181 - - PREDICTED: protein AUXIN SIGNALING F-BOX 2-like [Jatropha curcas]
14 Hb_000002_440 0.0935988632 - - PREDICTED: MATH domain-containing protein At5g43560-like [Jatropha curcas]
15 Hb_110482_010 0.0938814215 - - hypothetical protein JCGZ_16907 [Jatropha curcas]
16 Hb_027405_020 0.0947628826 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Jatropha curcas]
17 Hb_010128_090 0.0956705338 - - PREDICTED: uncharacterized protein LOC105647377 [Jatropha curcas]
18 Hb_005946_170 0.0999206859 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
19 Hb_002813_010 0.1006460561 - - PREDICTED: uncharacterized protein LOC105641844 isoform X1 [Jatropha curcas]
20 Hb_025477_060 0.1032072568 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]

Gene co-expression network

sample Hb_004920_130 Hb_004920_130 Hb_002659_060 Hb_002659_060 Hb_004920_130--Hb_002659_060 Hb_033883_060 Hb_033883_060 Hb_004920_130--Hb_033883_060 Hb_001157_180 Hb_001157_180 Hb_004920_130--Hb_001157_180 Hb_031042_070 Hb_031042_070 Hb_004920_130--Hb_031042_070 Hb_000813_100 Hb_000813_100 Hb_004920_130--Hb_000813_100 Hb_000821_010 Hb_000821_010 Hb_004920_130--Hb_000821_010 Hb_000120_610 Hb_000120_610 Hb_002659_060--Hb_000120_610 Hb_000594_020 Hb_000594_020 Hb_002659_060--Hb_000594_020 Hb_000504_160 Hb_000504_160 Hb_002659_060--Hb_000504_160 Hb_002659_060--Hb_033883_060 Hb_004635_050 Hb_004635_050 Hb_002659_060--Hb_004635_050 Hb_033883_060--Hb_031042_070 Hb_001633_040 Hb_001633_040 Hb_033883_060--Hb_001633_040 Hb_033883_060--Hb_004635_050 Hb_017075_030 Hb_017075_030 Hb_033883_060--Hb_017075_030 Hb_010128_090 Hb_010128_090 Hb_001157_180--Hb_010128_090 Hb_001157_180--Hb_031042_070 Hb_000343_210 Hb_000343_210 Hb_001157_180--Hb_000343_210 Hb_001157_180--Hb_017075_030 Hb_000002_440 Hb_000002_440 Hb_001157_180--Hb_000002_440 Hb_031042_070--Hb_001633_040 Hb_007982_070 Hb_007982_070 Hb_031042_070--Hb_007982_070 Hb_000300_360 Hb_000300_360 Hb_031042_070--Hb_000300_360 Hb_002163_010 Hb_002163_010 Hb_031042_070--Hb_002163_010 Hb_007632_020 Hb_007632_020 Hb_031042_070--Hb_007632_020 Hb_000813_100--Hb_000594_020 Hb_000997_030 Hb_000997_030 Hb_000813_100--Hb_000997_030 Hb_004899_070 Hb_004899_070 Hb_000813_100--Hb_004899_070 Hb_147737_010 Hb_147737_010 Hb_000813_100--Hb_147737_010 Hb_000813_100--Hb_000002_440 Hb_001946_300 Hb_001946_300 Hb_000813_100--Hb_001946_300 Hb_000821_010--Hb_000002_440 Hb_000821_010--Hb_000594_020 Hb_000264_100 Hb_000264_100 Hb_000821_010--Hb_000264_100 Hb_010080_060 Hb_010080_060 Hb_000821_010--Hb_010080_060 Hb_000821_010--Hb_000997_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.3884 33.3058 7.53077 7.41896 34.5337 30.9067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.4496 7.35799 9.87673 18.2599 11.2225

CAGE analysis