Hb_015183_060

Information

Type -
Description -
Location Contig15183: 31649-34738
Sequence    

Annotation

kegg
ID rcu:RCOM_0469980
description hypothetical protein
nr
ID KDP46110.1
description hypothetical protein JCGZ_06621 [Jatropha curcas]
swissprot
ID P43293
description Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=1 SV=2
trembl
ID A0A067LMQ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06621 PE=4 SV=1
Gene Ontology
ID GO:0000166
description protein kinase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12915: 32238-33735 , PASA_asmbl_12917: 33840-34755
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015183_060 0.0 - - hypothetical protein JCGZ_06621 [Jatropha curcas]
2 Hb_008232_010 0.0765894731 transcription factor TF Family: C2C2-GATA GATA transcription factor, putative [Ricinus communis]
3 Hb_000982_080 0.0933793136 desease resistance Gene Name: AAA PREDICTED: 26S proteasome regulatory subunit 4 homolog A [Jatropha curcas]
4 Hb_000673_020 0.098527579 - - PREDICTED: ATP synthase subunit delta', mitochondrial [Jatropha curcas]
5 Hb_002016_080 0.0994716354 - - PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Jatropha curcas]
6 Hb_001892_070 0.1002682275 - - PREDICTED: uncharacterized protein LOC105634071 [Jatropha curcas]
7 Hb_000920_200 0.1008016088 - - PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X1 [Jatropha curcas]
8 Hb_000934_190 0.1010815745 - - SER/ARG-rich protein 34A [Theobroma cacao]
9 Hb_000413_280 0.1054869085 - - PREDICTED: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial [Jatropha curcas]
10 Hb_000465_070 0.1065881209 - - PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Jatropha curcas]
11 Hb_001414_030 0.1084198589 - - PREDICTED: aspartate-semialdehyde dehydrogenase [Jatropha curcas]
12 Hb_004324_270 0.1096614492 - - PREDICTED: mitochondrial carrier protein MTM1 [Jatropha curcas]
13 Hb_014720_110 0.1101405433 - - PREDICTED: GDSL esterase/lipase At5g62930 [Tarenaya hassleriana]
14 Hb_001979_020 0.1102225423 - - hypothetical protein OsJ_31823 [Oryza sativa Japonica Group]
15 Hb_034380_020 0.1102230824 - - PREDICTED: phosphoglycerate mutase-like [Jatropha curcas]
16 Hb_002631_180 0.1106610194 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-2 [Jatropha curcas]
17 Hb_000035_480 0.1112254125 - - PREDICTED: probable protein phosphatase 2C 59 [Jatropha curcas]
18 Hb_003622_040 0.111594541 - - PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
19 Hb_000329_760 0.112283083 - - PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM21 [Jatropha curcas]
20 Hb_001218_030 0.1125210709 - - PREDICTED: uncharacterized protein LOC105630612 [Jatropha curcas]

Gene co-expression network

sample Hb_015183_060 Hb_015183_060 Hb_008232_010 Hb_008232_010 Hb_015183_060--Hb_008232_010 Hb_000982_080 Hb_000982_080 Hb_015183_060--Hb_000982_080 Hb_000673_020 Hb_000673_020 Hb_015183_060--Hb_000673_020 Hb_002016_080 Hb_002016_080 Hb_015183_060--Hb_002016_080 Hb_001892_070 Hb_001892_070 Hb_015183_060--Hb_001892_070 Hb_000920_200 Hb_000920_200 Hb_015183_060--Hb_000920_200 Hb_008232_010--Hb_000982_080 Hb_001123_160 Hb_001123_160 Hb_008232_010--Hb_001123_160 Hb_011344_190 Hb_011344_190 Hb_008232_010--Hb_011344_190 Hb_004672_010 Hb_004672_010 Hb_008232_010--Hb_004672_010 Hb_003622_040 Hb_003622_040 Hb_008232_010--Hb_003622_040 Hb_003376_250 Hb_003376_250 Hb_000982_080--Hb_003376_250 Hb_000982_080--Hb_011344_190 Hb_005488_200 Hb_005488_200 Hb_000982_080--Hb_005488_200 Hb_001195_200 Hb_001195_200 Hb_000982_080--Hb_001195_200 Hb_006420_080 Hb_006420_080 Hb_000982_080--Hb_006420_080 Hb_013405_140 Hb_013405_140 Hb_000673_020--Hb_013405_140 Hb_003880_030 Hb_003880_030 Hb_000673_020--Hb_003880_030 Hb_000175_030 Hb_000175_030 Hb_000673_020--Hb_000175_030 Hb_027654_050 Hb_027654_050 Hb_000673_020--Hb_027654_050 Hb_000934_190 Hb_000934_190 Hb_000673_020--Hb_000934_190 Hb_000673_020--Hb_002016_080 Hb_002016_080--Hb_013405_140 Hb_011485_020 Hb_011485_020 Hb_002016_080--Hb_011485_020 Hb_000922_040 Hb_000922_040 Hb_002016_080--Hb_000922_040 Hb_000413_280 Hb_000413_280 Hb_002016_080--Hb_000413_280 Hb_003783_030 Hb_003783_030 Hb_002016_080--Hb_003783_030 Hb_001016_100 Hb_001016_100 Hb_001892_070--Hb_001016_100 Hb_000403_070 Hb_000403_070 Hb_001892_070--Hb_000403_070 Hb_002045_060 Hb_002045_060 Hb_001892_070--Hb_002045_060 Hb_008566_030 Hb_008566_030 Hb_001892_070--Hb_008566_030 Hb_000035_480 Hb_000035_480 Hb_001892_070--Hb_000035_480 Hb_000457_290 Hb_000457_290 Hb_001892_070--Hb_000457_290 Hb_001218_030 Hb_001218_030 Hb_000920_200--Hb_001218_030 Hb_002119_130 Hb_002119_130 Hb_000920_200--Hb_002119_130 Hb_006573_190 Hb_006573_190 Hb_000920_200--Hb_006573_190 Hb_001828_150 Hb_001828_150 Hb_000920_200--Hb_001828_150 Hb_000853_150 Hb_000853_150 Hb_000920_200--Hb_000853_150 Hb_001195_060 Hb_001195_060 Hb_000920_200--Hb_001195_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.87972 1.43216 3.06251 2.69601 1.16994 1.79653
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.56108 6.03478 4.85515 4.20531 3.67523

CAGE analysis