Hb_014430_010

Information

Type -
Description -
Location Contig14430: 3968-4300
Sequence    

Annotation

kegg
ID pop:POPTR_0004s17810g
description POPTRDRAFT_818176; hypothetical protein
nr
ID XP_012092570.1
description PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
swissprot
ID Q9FYB5
description Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2
trembl
ID A0A067JCD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06367 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014430_010 0.0 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
2 Hb_005539_120 0.2437348286 - - PREDICTED: probable LRR receptor-like protein kinase At1g51890 [Jatropha curcas]
3 Hb_000130_450 0.278875003 - - conserved hypothetical protein [Ricinus communis]
4 Hb_014720_010 0.3336931436 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000181_190 0.3405018615 - - PREDICTED: probable protein phosphatase 2C 39 [Jatropha curcas]
6 Hb_000878_140 0.3478306179 - - PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Jatropha curcas]
7 Hb_089889_010 0.3501797777 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
8 Hb_032208_020 0.356752541 - - hypothetical protein JCGZ_01894 [Jatropha curcas]
9 Hb_002685_050 0.358018645 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
10 Hb_005375_050 0.3598682635 - - inorganic pyrophosphatase, putative [Ricinus communis]
11 Hb_000264_120 0.3620507681 - - Stem-specific protein TSJT1, putative [Ricinus communis]
12 Hb_011512_160 0.3790064573 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001959_010 0.3790123219 - - myosin XI, putative [Ricinus communis]
14 Hb_156554_010 0.3793235746 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
15 Hb_002641_040 0.3825601118 - - class III peroxidase [Populus trichocarpa]
16 Hb_000200_200 0.3837817725 - - PREDICTED: putative zinc finger protein At1g68190 isoform X2 [Jatropha curcas]
17 Hb_000008_380 0.3884487086 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_002382_020 0.3892384337 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Jatropha curcas]
19 Hb_001332_030 0.3916143133 - - hypothetical protein JCGZ_21111 [Jatropha curcas]
20 Hb_002026_010 0.401106516 transcription factor TF Family: mTERF hypothetical protein CICLE_v10020375mg [Citrus clementina]

Gene co-expression network

sample Hb_014430_010 Hb_014430_010 Hb_005539_120 Hb_005539_120 Hb_014430_010--Hb_005539_120 Hb_000130_450 Hb_000130_450 Hb_014430_010--Hb_000130_450 Hb_014720_010 Hb_014720_010 Hb_014430_010--Hb_014720_010 Hb_000181_190 Hb_000181_190 Hb_014430_010--Hb_000181_190 Hb_000878_140 Hb_000878_140 Hb_014430_010--Hb_000878_140 Hb_089889_010 Hb_089889_010 Hb_014430_010--Hb_089889_010 Hb_005539_120--Hb_000130_450 Hb_002259_010 Hb_002259_010 Hb_005539_120--Hb_002259_010 Hb_001195_540 Hb_001195_540 Hb_005539_120--Hb_001195_540 Hb_002382_020 Hb_002382_020 Hb_005539_120--Hb_002382_020 Hb_005539_120--Hb_000181_190 Hb_000200_200 Hb_000200_200 Hb_000130_450--Hb_000200_200 Hb_000130_450--Hb_014720_010 Hb_005375_050 Hb_005375_050 Hb_000130_450--Hb_005375_050 Hb_000008_380 Hb_000008_380 Hb_000130_450--Hb_000008_380 Hb_005656_190 Hb_005656_190 Hb_000130_450--Hb_005656_190 Hb_000027_040 Hb_000027_040 Hb_000130_450--Hb_000027_040 Hb_014720_010--Hb_005375_050 Hb_014720_010--Hb_000008_380 Hb_011512_160 Hb_011512_160 Hb_014720_010--Hb_011512_160 Hb_014720_010--Hb_000878_140 Hb_004129_160 Hb_004129_160 Hb_014720_010--Hb_004129_160 Hb_000264_120 Hb_000264_120 Hb_000181_190--Hb_000264_120 Hb_000181_190--Hb_005375_050 Hb_000349_190 Hb_000349_190 Hb_000181_190--Hb_000349_190 Hb_036790_030 Hb_036790_030 Hb_000181_190--Hb_036790_030 Hb_004116_100 Hb_004116_100 Hb_000181_190--Hb_004116_100 Hb_002307_020 Hb_002307_020 Hb_000181_190--Hb_002307_020 Hb_000878_140--Hb_000008_380 Hb_001545_070 Hb_001545_070 Hb_000878_140--Hb_001545_070 Hb_007943_060 Hb_007943_060 Hb_000878_140--Hb_007943_060 Hb_007904_240 Hb_007904_240 Hb_000878_140--Hb_007904_240 Hb_000487_120 Hb_000487_120 Hb_000878_140--Hb_000487_120 Hb_003399_100 Hb_003399_100 Hb_089889_010--Hb_003399_100 Hb_002045_190 Hb_002045_190 Hb_089889_010--Hb_002045_190 Hb_001975_130 Hb_001975_130 Hb_089889_010--Hb_001975_130 Hb_089889_010--Hb_005375_050 Hb_001890_020 Hb_001890_020 Hb_089889_010--Hb_001890_020 Hb_030627_070 Hb_030627_070 Hb_089889_010--Hb_030627_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.122286 0 2.43277 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.87533 0.688258 1.02904 0 0

CAGE analysis