Hb_010931_020

Information

Type -
Description -
Location Contig10931: 5896-6471
Sequence    

Annotation

kegg
ID pop:POPTR_0004s00220g
description truncated Kunitz trypsin inhibitor family protein
nr
ID ACS92521.1
description Kunitz-type protease inhibitor KPI-F4 [Populus trichocarpa x Populus deltoides]
swissprot
ID -
description -
trembl
ID D1KFM4
description Kunitz-type protease inhibitor KPI-F4 OS=Populus trichocarpa x Populus nigra PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010931_020 0.0 - - Kunitz-type protease inhibitor KPI-F4 [Populus trichocarpa x Populus deltoides]
2 Hb_005503_010 0.1941723772 - - PREDICTED: probable protein Pop3 [Jatropha curcas]
3 Hb_007017_120 0.1945648211 - - PREDICTED: exocyst complex component EXO84A [Jatropha curcas]
4 Hb_000364_130 0.1969443404 - - unnamed protein product [Vitis vinifera]
5 Hb_001472_110 0.2004082799 desease resistance Gene Name: TIR_2 nucleoside-triphosphatase, putative [Ricinus communis]
6 Hb_026650_010 0.2053638823 - - nitrate transporter, putative [Ricinus communis]
7 Hb_002339_030 0.2061348076 - - o-methyltransferase, putative [Ricinus communis]
8 Hb_008066_060 0.2073901702 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]
9 Hb_002072_040 0.2095876541 - - PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
10 Hb_032621_010 0.2096988188 - - hypothetical protein PHAVU_006G197300g [Phaseolus vulgaris]
11 Hb_001102_060 0.2129916618 - - PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 isoform X1 [Jatropha curcas]
12 Hb_000143_020 0.2135541676 - - PREDICTED: isoflavone 2'-hydroxylase-like [Jatropha curcas]
13 Hb_000032_460 0.2155396175 - - calcineurin B, putative [Ricinus communis]
14 Hb_178252_010 0.2176191572 - - hypothetical protein POPTR_0018s01890g [Populus trichocarpa]
15 Hb_002301_110 0.2221531797 - - PREDICTED: protein E6-like [Populus euphratica]
16 Hb_003226_050 0.2245738115 - - Pectinesterase-3 precursor, putative [Ricinus communis]
17 Hb_002559_010 0.2253480144 - - hypothetical protein JCGZ_06274 [Jatropha curcas]
18 Hb_002809_020 0.2271892285 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
19 Hb_003768_100 0.2295014813 - - hypothetical protein JCGZ_19930 [Jatropha curcas]
20 Hb_010334_050 0.2313016287 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_010931_020 Hb_010931_020 Hb_005503_010 Hb_005503_010 Hb_010931_020--Hb_005503_010 Hb_007017_120 Hb_007017_120 Hb_010931_020--Hb_007017_120 Hb_000364_130 Hb_000364_130 Hb_010931_020--Hb_000364_130 Hb_001472_110 Hb_001472_110 Hb_010931_020--Hb_001472_110 Hb_026650_010 Hb_026650_010 Hb_010931_020--Hb_026650_010 Hb_002339_030 Hb_002339_030 Hb_010931_020--Hb_002339_030 Hb_005503_010--Hb_000364_130 Hb_005503_010--Hb_007017_120 Hb_003768_100 Hb_003768_100 Hb_005503_010--Hb_003768_100 Hb_001360_060 Hb_001360_060 Hb_005503_010--Hb_001360_060 Hb_003226_050 Hb_003226_050 Hb_005503_010--Hb_003226_050 Hb_001863_280 Hb_001863_280 Hb_005503_010--Hb_001863_280 Hb_008418_010 Hb_008418_010 Hb_007017_120--Hb_008418_010 Hb_002809_020 Hb_002809_020 Hb_007017_120--Hb_002809_020 Hb_178252_010 Hb_178252_010 Hb_007017_120--Hb_178252_010 Hb_007017_120--Hb_003768_100 Hb_000723_240 Hb_000723_240 Hb_007017_120--Hb_000723_240 Hb_003166_020 Hb_003166_020 Hb_007017_120--Hb_003166_020 Hb_002559_010 Hb_002559_010 Hb_000364_130--Hb_002559_010 Hb_000364_130--Hb_003226_050 Hb_000364_130--Hb_178252_010 Hb_000364_130--Hb_007017_120 Hb_006277_030 Hb_006277_030 Hb_000364_130--Hb_006277_030 Hb_164926_040 Hb_164926_040 Hb_001472_110--Hb_164926_040 Hb_000165_200 Hb_000165_200 Hb_001472_110--Hb_000165_200 Hb_002301_110 Hb_002301_110 Hb_001472_110--Hb_002301_110 Hb_001472_110--Hb_002339_030 Hb_003562_030 Hb_003562_030 Hb_001472_110--Hb_003562_030 Hb_002072_040 Hb_002072_040 Hb_001472_110--Hb_002072_040 Hb_032621_010 Hb_032621_010 Hb_026650_010--Hb_032621_010 Hb_003392_030 Hb_003392_030 Hb_026650_010--Hb_003392_030 Hb_026650_010--Hb_003166_020 Hb_000800_060 Hb_000800_060 Hb_026650_010--Hb_000800_060 Hb_000668_070 Hb_000668_070 Hb_026650_010--Hb_000668_070 Hb_000917_330 Hb_000917_330 Hb_026650_010--Hb_000917_330 Hb_002339_030--Hb_000165_200 Hb_002339_030--Hb_002301_110 Hb_009767_050 Hb_009767_050 Hb_002339_030--Hb_009767_050 Hb_002339_030--Hb_164926_040 Hb_002339_030--Hb_002072_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.599305 0.753428 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.196688 1.7256 0.216782

CAGE analysis