Hb_002559_010

Information

Type -
Description -
Location Contig2559: 247-993
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa018063mg
description hypothetical protein
nr
ID KDP37218.1
description hypothetical protein JCGZ_06274 [Jatropha curcas]
swissprot
ID Q8GYM1
description Glutathione S-transferase U22 OS=Arabidopsis thaliana GN=GSTU22 PE=1 SV=1
trembl
ID A0A067KQJ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06274 PE=3 SV=1
Gene Ontology
ID GO:0004462
description probable glutathione s-transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002559_010 0.0 - - hypothetical protein JCGZ_06274 [Jatropha curcas]
2 Hb_000364_130 0.0821197792 - - unnamed protein product [Vitis vinifera]
3 Hb_000343_220 0.1303181553 - - hypothetical protein CISIN_1g037489mg [Citrus sinensis]
4 Hb_000490_040 0.1387275247 - - PREDICTED: cyclin-D3-1 [Jatropha curcas]
5 Hb_002081_190 0.1472225306 - - hypothetical protein EUGRSUZ_I010391, partial [Eucalyptus grandis]
6 Hb_005356_030 0.1498613332 - - protein binding protein, putative [Ricinus communis]
7 Hb_135673_010 0.1522289 - - Germin-like protein subfamily 1 member 6 precursor [Populus trichocarpa]
8 Hb_003226_050 0.15223495 - - Pectinesterase-3 precursor, putative [Ricinus communis]
9 Hb_103452_010 0.152764305 - - hypothetical protein VITISV_027174 [Vitis vinifera]
10 Hb_001102_060 0.1530817729 - - PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 isoform X1 [Jatropha curcas]
11 Hb_000002_150 0.154760157 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003020_340 0.1559185128 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
13 Hb_000161_230 0.159610519 - - lactoylglutathione lyase, putative [Ricinus communis]
14 Hb_001006_050 0.1599323737 - - PREDICTED: uncharacterized protein LOC101777526 [Setaria italica]
15 Hb_178252_010 0.1617116225 - - hypothetical protein POPTR_0018s01890g [Populus trichocarpa]
16 Hb_000128_050 0.1636995037 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000187_110 0.165815956 - - PREDICTED: serine carboxypeptidase-like 7 [Jatropha curcas]
18 Hb_003189_010 0.169032629 - - hypothetical protein EUGRSUZ_G02605 [Eucalyptus grandis]
19 Hb_006711_040 0.1706617466 - - PREDICTED: probable protein ABIL5 [Jatropha curcas]
20 Hb_004116_090 0.1728306231 - - -

Gene co-expression network

sample Hb_002559_010 Hb_002559_010 Hb_000364_130 Hb_000364_130 Hb_002559_010--Hb_000364_130 Hb_000343_220 Hb_000343_220 Hb_002559_010--Hb_000343_220 Hb_000490_040 Hb_000490_040 Hb_002559_010--Hb_000490_040 Hb_002081_190 Hb_002081_190 Hb_002559_010--Hb_002081_190 Hb_005356_030 Hb_005356_030 Hb_002559_010--Hb_005356_030 Hb_135673_010 Hb_135673_010 Hb_002559_010--Hb_135673_010 Hb_003226_050 Hb_003226_050 Hb_000364_130--Hb_003226_050 Hb_005503_010 Hb_005503_010 Hb_000364_130--Hb_005503_010 Hb_178252_010 Hb_178252_010 Hb_000364_130--Hb_178252_010 Hb_007017_120 Hb_007017_120 Hb_000364_130--Hb_007017_120 Hb_006277_030 Hb_006277_030 Hb_000364_130--Hb_006277_030 Hb_001252_050 Hb_001252_050 Hb_000343_220--Hb_001252_050 Hb_006711_040 Hb_006711_040 Hb_000343_220--Hb_006711_040 Hb_000343_220--Hb_002081_190 Hb_000343_220--Hb_000490_040 Hb_000272_010 Hb_000272_010 Hb_000343_220--Hb_000272_010 Hb_000128_050 Hb_000128_050 Hb_000343_220--Hb_000128_050 Hb_000490_040--Hb_006711_040 Hb_009535_010 Hb_009535_010 Hb_000490_040--Hb_009535_010 Hb_002276_250 Hb_002276_250 Hb_000490_040--Hb_002276_250 Hb_004357_030 Hb_004357_030 Hb_000490_040--Hb_004357_030 Hb_000535_040 Hb_000535_040 Hb_000490_040--Hb_000535_040 Hb_002081_190--Hb_000128_050 Hb_173764_010 Hb_173764_010 Hb_002081_190--Hb_173764_010 Hb_001366_380 Hb_001366_380 Hb_002081_190--Hb_001366_380 Hb_002498_290 Hb_002498_290 Hb_002081_190--Hb_002498_290 Hb_002081_190--Hb_000272_010 Hb_103452_010 Hb_103452_010 Hb_005356_030--Hb_103452_010 Hb_005356_030--Hb_135673_010 Hb_001006_050 Hb_001006_050 Hb_005356_030--Hb_001006_050 Hb_004116_090 Hb_004116_090 Hb_005356_030--Hb_004116_090 Hb_151094_020 Hb_151094_020 Hb_005356_030--Hb_151094_020 Hb_000002_150 Hb_000002_150 Hb_005356_030--Hb_000002_150 Hb_135673_010--Hb_103452_010 Hb_135673_010--Hb_001006_050 Hb_135673_010--Hb_004116_090 Hb_135673_010--Hb_151094_020 Hb_135673_010--Hb_002498_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0370693 8.47582 8.27616 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 11.1878 1.07981

CAGE analysis