Hb_000364_130

Information

Type -
Description -
Location Contig364: 145864-150667
Sequence    

Annotation

kegg
ID sot:102585071
description BAHD acyltransferase DCR-like
nr
ID CBI21394.3
description unnamed protein product [Vitis vinifera]
swissprot
ID A9ZPJ7
description Agmatine coumaroyltransferase-2 OS=Hordeum vulgare GN=ACT-2 PE=1 SV=1
trembl
ID M1CL31
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027127 PE=4 SV=1
Gene Ontology
ID GO:0016747
description uncharacterized acetyltransferase at3g50280-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_130 0.0 - - unnamed protein product [Vitis vinifera]
2 Hb_002559_010 0.0821197792 - - hypothetical protein JCGZ_06274 [Jatropha curcas]
3 Hb_003226_050 0.0972150716 - - Pectinesterase-3 precursor, putative [Ricinus communis]
4 Hb_005503_010 0.1235458227 - - PREDICTED: probable protein Pop3 [Jatropha curcas]
5 Hb_178252_010 0.143292095 - - hypothetical protein POPTR_0018s01890g [Populus trichocarpa]
6 Hb_007017_120 0.1454632601 - - PREDICTED: exocyst complex component EXO84A [Jatropha curcas]
7 Hb_006277_030 0.1497244371 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000187_110 0.1514833729 - - PREDICTED: serine carboxypeptidase-like 7 [Jatropha curcas]
9 Hb_000002_150 0.1516211183 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001102_060 0.1522900686 - - PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 isoform X1 [Jatropha curcas]
11 Hb_003768_100 0.1536422366 - - hypothetical protein JCGZ_19930 [Jatropha curcas]
12 Hb_002025_380 0.1539440628 - - Uncharacterized protein TCM_011176 [Theobroma cacao]
13 Hb_003020_340 0.1556611736 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
14 Hb_000161_230 0.1558753733 - - lactoylglutathione lyase, putative [Ricinus communis]
15 Hb_003189_010 0.1586250624 - - hypothetical protein EUGRSUZ_G02605 [Eucalyptus grandis]
16 Hb_000544_130 0.1623623634 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
17 Hb_000147_010 0.1667617112 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
18 Hb_002809_020 0.1670943655 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
19 Hb_002818_170 0.1695441529 - - hypothetical protein POPTR_0014s10650g [Populus trichocarpa]
20 Hb_000925_120 0.1704921467 - - Spotted leaf protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000364_130 Hb_000364_130 Hb_002559_010 Hb_002559_010 Hb_000364_130--Hb_002559_010 Hb_003226_050 Hb_003226_050 Hb_000364_130--Hb_003226_050 Hb_005503_010 Hb_005503_010 Hb_000364_130--Hb_005503_010 Hb_178252_010 Hb_178252_010 Hb_000364_130--Hb_178252_010 Hb_007017_120 Hb_007017_120 Hb_000364_130--Hb_007017_120 Hb_006277_030 Hb_006277_030 Hb_000364_130--Hb_006277_030 Hb_000343_220 Hb_000343_220 Hb_002559_010--Hb_000343_220 Hb_000490_040 Hb_000490_040 Hb_002559_010--Hb_000490_040 Hb_002081_190 Hb_002081_190 Hb_002559_010--Hb_002081_190 Hb_005356_030 Hb_005356_030 Hb_002559_010--Hb_005356_030 Hb_135673_010 Hb_135673_010 Hb_002559_010--Hb_135673_010 Hb_003768_100 Hb_003768_100 Hb_003226_050--Hb_003768_100 Hb_000544_130 Hb_000544_130 Hb_003226_050--Hb_000544_130 Hb_000979_080 Hb_000979_080 Hb_003226_050--Hb_000979_080 Hb_000187_110 Hb_000187_110 Hb_003226_050--Hb_000187_110 Hb_000161_230 Hb_000161_230 Hb_003226_050--Hb_000161_230 Hb_005503_010--Hb_007017_120 Hb_005503_010--Hb_003768_100 Hb_001360_060 Hb_001360_060 Hb_005503_010--Hb_001360_060 Hb_005503_010--Hb_003226_050 Hb_001863_280 Hb_001863_280 Hb_005503_010--Hb_001863_280 Hb_001102_060 Hb_001102_060 Hb_178252_010--Hb_001102_060 Hb_002809_020 Hb_002809_020 Hb_178252_010--Hb_002809_020 Hb_178252_010--Hb_007017_120 Hb_027242_010 Hb_027242_010 Hb_178252_010--Hb_027242_010 Hb_055154_010 Hb_055154_010 Hb_178252_010--Hb_055154_010 Hb_003480_010 Hb_003480_010 Hb_178252_010--Hb_003480_010 Hb_008418_010 Hb_008418_010 Hb_007017_120--Hb_008418_010 Hb_007017_120--Hb_002809_020 Hb_007017_120--Hb_003768_100 Hb_000723_240 Hb_000723_240 Hb_007017_120--Hb_000723_240 Hb_003166_020 Hb_003166_020 Hb_007017_120--Hb_003166_020 Hb_002818_170 Hb_002818_170 Hb_006277_030--Hb_002818_170 Hb_002025_380 Hb_002025_380 Hb_006277_030--Hb_002025_380 Hb_003189_010 Hb_003189_010 Hb_006277_030--Hb_003189_010 Hb_006501_100 Hb_006501_100 Hb_006277_030--Hb_006501_100 Hb_004282_010 Hb_004282_010 Hb_006277_030--Hb_004282_010 Hb_005144_080 Hb_005144_080 Hb_006277_030--Hb_005144_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0170791 1.29558 1.86754 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.73032 0.254748

CAGE analysis