Hb_007007_010

Information

Type -
Description -
Location Contig7007: 1331-6126
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007007_010 0.0 - - -
2 Hb_004650_080 0.2718727905 - - -
3 Hb_099698_010 0.2773723397 - - -
4 Hb_005460_030 0.2818326881 - - PREDICTED: RING-H2 finger protein ATL65 [Jatropha curcas]
5 Hb_006076_020 0.2832437759 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
6 Hb_000040_050 0.2855142477 - - PREDICTED: uncharacterized protein LOC102617857 isoform X1 [Citrus sinensis]
7 Hb_012181_010 0.2855280997 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_004712_110 0.2880653627 - - 30S ribosomal protein S10, putative [Ricinus communis]
9 Hb_031073_010 0.2894340388 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
10 Hb_002814_120 0.2946814622 - - PREDICTED: uncharacterized protein LOC105633463 [Jatropha curcas]
11 Hb_002234_220 0.298115845 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X1 [Jatropha curcas]
12 Hb_001329_260 0.3018153876 - - PREDICTED: uncharacterized protein LOC105642694 isoform X1 [Jatropha curcas]
13 Hb_011515_030 0.302496962 - - -
14 Hb_000544_040 0.3035944964 - - PREDICTED: mitogen-activated protein kinase 9-like [Jatropha curcas]
15 Hb_030627_040 0.3052241166 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
16 Hb_001390_010 0.30541231 - - PREDICTED: uncharacterized protein LOC105635994 [Jatropha curcas]
17 Hb_000115_070 0.3061210444 - - hypothetical protein RCOM_0030010 [Ricinus communis]
18 Hb_000345_210 0.3074147702 - - PREDICTED: uncharacterized protein LOC105647523 [Jatropha curcas]
19 Hb_002232_290 0.3104925583 - - -
20 Hb_141838_010 0.3110226394 - - -

Gene co-expression network

sample Hb_007007_010 Hb_007007_010 Hb_004650_080 Hb_004650_080 Hb_007007_010--Hb_004650_080 Hb_099698_010 Hb_099698_010 Hb_007007_010--Hb_099698_010 Hb_005460_030 Hb_005460_030 Hb_007007_010--Hb_005460_030 Hb_006076_020 Hb_006076_020 Hb_007007_010--Hb_006076_020 Hb_000040_050 Hb_000040_050 Hb_007007_010--Hb_000040_050 Hb_012181_010 Hb_012181_010 Hb_007007_010--Hb_012181_010 Hb_001329_260 Hb_001329_260 Hb_004650_080--Hb_001329_260 Hb_004097_020 Hb_004097_020 Hb_004650_080--Hb_004097_020 Hb_003768_040 Hb_003768_040 Hb_004650_080--Hb_003768_040 Hb_001946_360 Hb_001946_360 Hb_004650_080--Hb_001946_360 Hb_168978_040 Hb_168978_040 Hb_004650_080--Hb_168978_040 Hb_097433_010 Hb_097433_010 Hb_004650_080--Hb_097433_010 Hb_099698_010--Hb_000040_050 Hb_004712_110 Hb_004712_110 Hb_099698_010--Hb_004712_110 Hb_008406_130 Hb_008406_130 Hb_099698_010--Hb_008406_130 Hb_007441_070 Hb_007441_070 Hb_099698_010--Hb_007441_070 Hb_000173_210 Hb_000173_210 Hb_099698_010--Hb_000173_210 Hb_003243_020 Hb_003243_020 Hb_099698_010--Hb_003243_020 Hb_004143_070 Hb_004143_070 Hb_005460_030--Hb_004143_070 Hb_000181_310 Hb_000181_310 Hb_005460_030--Hb_000181_310 Hb_002159_030 Hb_002159_030 Hb_005460_030--Hb_002159_030 Hb_030627_040 Hb_030627_040 Hb_005460_030--Hb_030627_040 Hb_004324_240 Hb_004324_240 Hb_005460_030--Hb_004324_240 Hb_003216_120 Hb_003216_120 Hb_005460_030--Hb_003216_120 Hb_004531_090 Hb_004531_090 Hb_006076_020--Hb_004531_090 Hb_002400_270 Hb_002400_270 Hb_006076_020--Hb_002400_270 Hb_001846_060 Hb_001846_060 Hb_006076_020--Hb_001846_060 Hb_011457_110 Hb_011457_110 Hb_006076_020--Hb_011457_110 Hb_009421_030 Hb_009421_030 Hb_006076_020--Hb_009421_030 Hb_000291_120 Hb_000291_120 Hb_006076_020--Hb_000291_120 Hb_000040_050--Hb_030627_040 Hb_000040_050--Hb_004712_110 Hb_004376_030 Hb_004376_030 Hb_000040_050--Hb_004376_030 Hb_000261_520 Hb_000261_520 Hb_000040_050--Hb_000261_520 Hb_001534_070 Hb_001534_070 Hb_000040_050--Hb_001534_070 Hb_000504_080 Hb_000504_080 Hb_012181_010--Hb_000504_080 Hb_012181_010--Hb_004650_080 Hb_159555_010 Hb_159555_010 Hb_012181_010--Hb_159555_010 Hb_000115_070 Hb_000115_070 Hb_012181_010--Hb_000115_070 Hb_000424_160 Hb_000424_160 Hb_012181_010--Hb_000424_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.521941 0.0314578 0.0582401 0.0717824 0.807253 0.149806
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0677747 0.120288 0 0.266532

CAGE analysis