Hb_005883_040

Information

Type -
Description -
Location Contig5883: 32429-32812
Sequence    

Annotation

kegg
ID pop:POPTR_0015s08000g
description POPTRDRAFT_776013; hypothetical protein
nr
ID KDP31170.1
description hypothetical protein JCGZ_11546 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KFY9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11546 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005883_040 0.0 - - hypothetical protein JCGZ_11546 [Jatropha curcas]
2 Hb_057247_010 0.2154043638 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
3 Hb_070385_010 0.2184819102 - - PREDICTED: uncharacterized protein LOC103323653 [Prunus mume]
4 Hb_101020_010 0.2191552594 - - -
5 Hb_007137_060 0.2396904282 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]
6 Hb_130134_030 0.2403355011 transcription factor TF Family: C3H hypothetical protein JCGZ_14472 [Jatropha curcas]
7 Hb_077211_010 0.2424718995 - - PREDICTED: lariat debranching enzyme-like [Jatropha curcas]
8 Hb_000136_190 0.242595681 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
9 Hb_001916_060 0.2458385932 - - PREDICTED: putative protein FAR1-RELATED SEQUENCE 10 isoform X2 [Jatropha curcas]
10 Hb_006269_040 0.2475996235 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
11 Hb_006230_040 0.2482047832 - - kinase, putative [Ricinus communis]
12 Hb_037793_010 0.2523212035 - - PREDICTED: microtubule-associated protein 70-2-like [Jatropha curcas]
13 Hb_088428_010 0.2545602172 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
14 Hb_000160_150 0.2566689539 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo]
15 Hb_124961_010 0.2568884312 - - hypothetical protein EUGRSUZ_B03893 [Eucalyptus grandis]
16 Hb_034667_020 0.257707427 - - conserved hypothetical protein [Ricinus communis]
17 Hb_171619_010 0.2580459579 - - protein binding protein, putative [Ricinus communis]
18 Hb_114984_010 0.2614173579 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000245_160 0.2620820342 - - PREDICTED: mavicyanin [Jatropha curcas]
20 Hb_005517_010 0.2634023562 - - Chorismate mutase, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_005883_040 Hb_005883_040 Hb_057247_010 Hb_057247_010 Hb_005883_040--Hb_057247_010 Hb_070385_010 Hb_070385_010 Hb_005883_040--Hb_070385_010 Hb_101020_010 Hb_101020_010 Hb_005883_040--Hb_101020_010 Hb_007137_060 Hb_007137_060 Hb_005883_040--Hb_007137_060 Hb_130134_030 Hb_130134_030 Hb_005883_040--Hb_130134_030 Hb_077211_010 Hb_077211_010 Hb_005883_040--Hb_077211_010 Hb_076233_020 Hb_076233_020 Hb_057247_010--Hb_076233_020 Hb_004570_050 Hb_004570_050 Hb_057247_010--Hb_004570_050 Hb_006816_340 Hb_006816_340 Hb_057247_010--Hb_006816_340 Hb_000136_190 Hb_000136_190 Hb_057247_010--Hb_000136_190 Hb_182249_010 Hb_182249_010 Hb_057247_010--Hb_182249_010 Hb_003297_020 Hb_003297_020 Hb_070385_010--Hb_003297_020 Hb_002249_110 Hb_002249_110 Hb_070385_010--Hb_002249_110 Hb_070385_010--Hb_130134_030 Hb_134956_010 Hb_134956_010 Hb_070385_010--Hb_134956_010 Hb_088428_010 Hb_088428_010 Hb_070385_010--Hb_088428_010 Hb_130134_020 Hb_130134_020 Hb_070385_010--Hb_130134_020 Hb_009693_030 Hb_009693_030 Hb_101020_010--Hb_009693_030 Hb_001916_060 Hb_001916_060 Hb_101020_010--Hb_001916_060 Hb_000160_150 Hb_000160_150 Hb_101020_010--Hb_000160_150 Hb_007136_020 Hb_007136_020 Hb_101020_010--Hb_007136_020 Hb_101020_010--Hb_003297_020 Hb_124961_010 Hb_124961_010 Hb_101020_010--Hb_124961_010 Hb_001442_030 Hb_001442_030 Hb_007137_060--Hb_001442_030 Hb_002235_120 Hb_002235_120 Hb_007137_060--Hb_002235_120 Hb_007137_060--Hb_077211_010 Hb_004994_340 Hb_004994_340 Hb_007137_060--Hb_004994_340 Hb_007137_060--Hb_130134_030 Hb_020805_010 Hb_020805_010 Hb_007137_060--Hb_020805_010 Hb_130134_030--Hb_130134_020 Hb_178041_010 Hb_178041_010 Hb_130134_030--Hb_178041_010 Hb_130134_030--Hb_088428_010 Hb_003376_070 Hb_003376_070 Hb_130134_030--Hb_003376_070 Hb_121467_010 Hb_121467_010 Hb_130134_030--Hb_121467_010 Hb_130134_030--Hb_077211_010 Hb_183980_010 Hb_183980_010 Hb_077211_010--Hb_183980_010 Hb_006960_030 Hb_006960_030 Hb_077211_010--Hb_006960_030 Hb_077211_010--Hb_003297_020 Hb_001935_190 Hb_001935_190 Hb_077211_010--Hb_001935_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.272558 0.0973076 0.309845 0.182931 0.36831 0.668915
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0732668 0

CAGE analysis