Hb_005730_090

Information

Type -
Description -
Location Contig5730: 110146-111234
Sequence    

Annotation

kegg
ID rcu:RCOM_0313070
description hypothetical protein
nr
ID XP_012069007.1
description PREDICTED: uncharacterized protein LOC105631484 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9N3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24793 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005730_090 0.0 - - PREDICTED: uncharacterized protein LOC105631484 [Jatropha curcas]
2 Hb_009545_100 0.0642268768 - - PREDICTED: protein OBERON 1 [Jatropha curcas]
3 Hb_000258_160 0.0689551465 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006420_040 0.0689620326 transcription factor TF Family: Orphans PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X2 [Jatropha curcas]
5 Hb_000041_110 0.0760504144 - - PREDICTED: WW domain-binding protein 11 isoform X1 [Jatropha curcas]
6 Hb_001550_060 0.0773911399 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X4 [Jatropha curcas]
7 Hb_000731_270 0.0776740158 - - PREDICTED: polyadenylate-binding protein RBP45B isoform X1 [Jatropha curcas]
8 Hb_000780_230 0.0796366004 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]
9 Hb_000347_070 0.0797654445 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007645_100 0.0809352827 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105640858 isoform X1 [Jatropha curcas]
11 Hb_000343_120 0.0810761436 - - PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curcas]
12 Hb_001104_160 0.0814864036 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
13 Hb_005054_090 0.0815126333 - - PREDICTED: uncharacterized protein At2g39910 isoform X1 [Jatropha curcas]
14 Hb_000792_010 0.0819354176 - - PREDICTED: mRNA-capping enzyme [Jatropha curcas]
15 Hb_000028_280 0.0827207023 transcription factor TF Family: NF-X1 PREDICTED: NF-X1-type zinc finger protein NFXL1 [Jatropha curcas]
16 Hb_005065_010 0.0833579077 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI11 [Jatropha curcas]
17 Hb_004079_060 0.0834424989 - - hypothetical protein JCGZ_07228 [Jatropha curcas]
18 Hb_000441_120 0.0853470099 - - PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_000029_300 0.0858852779 - - hypothetical protein JCGZ_10048 [Jatropha curcas]
20 Hb_002518_260 0.0861028461 - - PREDICTED: zinc finger CCCH domain-containing protein 40-like [Jatropha curcas]

Gene co-expression network

sample Hb_005730_090 Hb_005730_090 Hb_009545_100 Hb_009545_100 Hb_005730_090--Hb_009545_100 Hb_000258_160 Hb_000258_160 Hb_005730_090--Hb_000258_160 Hb_006420_040 Hb_006420_040 Hb_005730_090--Hb_006420_040 Hb_000041_110 Hb_000041_110 Hb_005730_090--Hb_000041_110 Hb_001550_060 Hb_001550_060 Hb_005730_090--Hb_001550_060 Hb_000731_270 Hb_000731_270 Hb_005730_090--Hb_000731_270 Hb_002025_020 Hb_002025_020 Hb_009545_100--Hb_002025_020 Hb_000343_120 Hb_000343_120 Hb_009545_100--Hb_000343_120 Hb_000347_070 Hb_000347_070 Hb_009545_100--Hb_000347_070 Hb_000116_500 Hb_000116_500 Hb_009545_100--Hb_000116_500 Hb_003029_110 Hb_003029_110 Hb_009545_100--Hb_003029_110 Hb_000225_040 Hb_000225_040 Hb_009545_100--Hb_000225_040 Hb_003494_020 Hb_003494_020 Hb_000258_160--Hb_003494_020 Hb_000258_160--Hb_000041_110 Hb_019863_070 Hb_019863_070 Hb_000258_160--Hb_019863_070 Hb_000340_530 Hb_000340_530 Hb_000258_160--Hb_000340_530 Hb_004079_060 Hb_004079_060 Hb_000258_160--Hb_004079_060 Hb_162275_050 Hb_162275_050 Hb_000258_160--Hb_162275_050 Hb_006420_040--Hb_001550_060 Hb_000441_120 Hb_000441_120 Hb_006420_040--Hb_000441_120 Hb_000671_070 Hb_000671_070 Hb_006420_040--Hb_000671_070 Hb_000025_320 Hb_000025_320 Hb_006420_040--Hb_000025_320 Hb_003206_130 Hb_003206_130 Hb_006420_040--Hb_003206_130 Hb_009503_030 Hb_009503_030 Hb_006420_040--Hb_009503_030 Hb_002518_260 Hb_002518_260 Hb_000041_110--Hb_002518_260 Hb_009486_140 Hb_009486_140 Hb_000041_110--Hb_009486_140 Hb_000297_010 Hb_000297_010 Hb_000041_110--Hb_000297_010 Hb_000792_010 Hb_000792_010 Hb_000041_110--Hb_000792_010 Hb_000329_710 Hb_000329_710 Hb_000041_110--Hb_000329_710 Hb_012395_140 Hb_012395_140 Hb_001550_060--Hb_012395_140 Hb_001550_060--Hb_003206_130 Hb_001550_060--Hb_000025_320 Hb_001195_320 Hb_001195_320 Hb_001550_060--Hb_001195_320 Hb_000395_070 Hb_000395_070 Hb_001550_060--Hb_000395_070 Hb_000731_270--Hb_000347_070 Hb_007645_100 Hb_007645_100 Hb_000731_270--Hb_007645_100 Hb_000207_180 Hb_000207_180 Hb_000731_270--Hb_000207_180 Hb_000731_270--Hb_006420_040 Hb_004254_090 Hb_004254_090 Hb_000731_270--Hb_004254_090 Hb_000731_270--Hb_000441_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.9036 46.4074 19.6243 32.1954 57.5472 32.9121
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.211 36.7434 39.9045 41.8375 38.909

CAGE analysis