Hb_009486_140

Information

Type -
Description -
Location Contig9486: 80624-84435
Sequence    

Annotation

kegg
ID cit:102618644
description hypothetical protein
nr
ID XP_012083737.1
description PREDICTED: uncharacterized protein LOC105643248 [Jatropha curcas]
swissprot
ID Q8RY89
description Phosphatidylinositol 4-phosphate 5-kinase 8 OS=Arabidopsis thaliana GN=PIP5K8 PE=1 SV=1
trembl
ID A0A067JY43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14662 PE=4 SV=1
Gene Ontology
ID GO:0008168
description phosphatidylinositol-4-phosphate 5-kinase 8 -like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63357: 81743-82417 , PASA_asmbl_63358: 81036-84420
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009486_140 0.0 - - PREDICTED: uncharacterized protein LOC105643248 [Jatropha curcas]
2 Hb_002518_260 0.0483792895 - - PREDICTED: zinc finger CCCH domain-containing protein 40-like [Jatropha curcas]
3 Hb_000041_110 0.0568811978 - - PREDICTED: WW domain-binding protein 11 isoform X1 [Jatropha curcas]
4 Hb_000329_710 0.0579623715 - - PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Jatropha curcas]
5 Hb_011386_010 0.0611240377 - - mitochondrial carrier protein, putative [Ricinus communis]
6 Hb_156279_020 0.0643298935 - - ATP-dependent clp protease ATP-binding subunit clpx, putative [Ricinus communis]
7 Hb_005054_110 0.065703037 - - PREDICTED: adenylosuccinate lyase-like [Jatropha curcas]
8 Hb_000684_470 0.0658167674 transcription factor TF Family: Orphans PREDICTED: two-component response regulator-like APRR7 [Jatropha curcas]
9 Hb_029510_050 0.0700989675 - - PREDICTED: golgin candidate 5 [Jatropha curcas]
10 Hb_005463_100 0.0702970686 - - hypothetical protein POPTR_0001s08400g [Populus trichocarpa]
11 Hb_001357_020 0.0706043183 - - PREDICTED: EH domain-containing protein 1 isoform X2 [Jatropha curcas]
12 Hb_001004_060 0.0725125138 - - PREDICTED: uncharacterized protein LOC105630220 isoform X4 [Jatropha curcas]
13 Hb_005686_090 0.0756477462 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X1 [Jatropha curcas]
14 Hb_004254_090 0.075849142 - - PREDICTED: cleavage stimulating factor 64 [Jatropha curcas]
15 Hb_002263_020 0.0760064772 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like [Jatropha curcas]
16 Hb_000028_480 0.077386062 - - PREDICTED: putative 3,4-dihydroxy-2-butanone kinase [Jatropha curcas]
17 Hb_002006_030 0.0778810738 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER [Jatropha curcas]
18 Hb_005116_160 0.0780387721 transcription factor TF Family: TRAF -
19 Hb_009767_110 0.0792521497 - - -
20 Hb_000317_050 0.0794002828 - - formiminotransferase-cyclodeaminase, putative [Ricinus communis]

Gene co-expression network

sample Hb_009486_140 Hb_009486_140 Hb_002518_260 Hb_002518_260 Hb_009486_140--Hb_002518_260 Hb_000041_110 Hb_000041_110 Hb_009486_140--Hb_000041_110 Hb_000329_710 Hb_000329_710 Hb_009486_140--Hb_000329_710 Hb_011386_010 Hb_011386_010 Hb_009486_140--Hb_011386_010 Hb_156279_020 Hb_156279_020 Hb_009486_140--Hb_156279_020 Hb_005054_110 Hb_005054_110 Hb_009486_140--Hb_005054_110 Hb_002518_260--Hb_000041_110 Hb_000792_010 Hb_000792_010 Hb_002518_260--Hb_000792_010 Hb_000028_480 Hb_000028_480 Hb_002518_260--Hb_000028_480 Hb_002518_260--Hb_011386_010 Hb_002518_260--Hb_000329_710 Hb_000258_160 Hb_000258_160 Hb_000041_110--Hb_000258_160 Hb_000297_010 Hb_000297_010 Hb_000041_110--Hb_000297_010 Hb_000041_110--Hb_000792_010 Hb_000041_110--Hb_000329_710 Hb_000329_710--Hb_000792_010 Hb_000329_710--Hb_011386_010 Hb_001004_060 Hb_001004_060 Hb_000329_710--Hb_001004_060 Hb_011386_010--Hb_005054_110 Hb_002078_350 Hb_002078_350 Hb_011386_010--Hb_002078_350 Hb_011386_010--Hb_156279_020 Hb_011386_010--Hb_000792_010 Hb_000331_260 Hb_000331_260 Hb_156279_020--Hb_000331_260 Hb_005269_070 Hb_005269_070 Hb_156279_020--Hb_005269_070 Hb_156279_020--Hb_002078_350 Hb_000331_550 Hb_000331_550 Hb_156279_020--Hb_000331_550 Hb_000684_470 Hb_000684_470 Hb_156279_020--Hb_000684_470 Hb_000035_180 Hb_000035_180 Hb_156279_020--Hb_000035_180 Hb_000049_210 Hb_000049_210 Hb_005054_110--Hb_000049_210 Hb_000260_350 Hb_000260_350 Hb_005054_110--Hb_000260_350 Hb_149985_010 Hb_149985_010 Hb_005054_110--Hb_149985_010 Hb_019863_070 Hb_019863_070 Hb_005054_110--Hb_019863_070 Hb_001304_110 Hb_001304_110 Hb_005054_110--Hb_001304_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.3559 17.718 13.5891 14.4955 16.0287 15.3464
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.0017 21.5488 23.8092 20.187 24.9438

CAGE analysis