Hb_004781_010

Information

Type -
Description -
Location Contig4781: 17193-18191
Sequence    

Annotation

kegg
ID vvi:100264706
description potassium transporter 11
nr
ID XP_011018317.1
description PREDICTED: potassium transporter 11-like [Populus euphratica]
swissprot
ID O64769
description Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=2 SV=1
trembl
ID A5B0U6
description Potassium transporter OS=Vitis vinifera GN=VIT_01s0011g01510 PE=3 SV=1
Gene Ontology
ID GO:0016021
description potassium transporter 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004781_010 0.0 - - PREDICTED: potassium transporter 11-like [Populus euphratica]
2 Hb_010775_040 0.0749935304 - - PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Jatropha curcas]
3 Hb_029243_030 0.0777380482 - - PREDICTED: regulatory-associated protein of TOR 1 isoform X1 [Jatropha curcas]
4 Hb_000078_120 0.0800411215 - - PREDICTED: BRCA1-associated protein [Jatropha curcas]
5 Hb_000917_230 0.0807122063 - - PREDICTED: coiled-coil domain-containing protein 130-like [Jatropha curcas]
6 Hb_006452_100 0.080896356 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105629120 [Jatropha curcas]
7 Hb_023001_040 0.081279656 - - Metallopeptidase M24 family protein isoform 1 [Theobroma cacao]
8 Hb_017387_010 0.0814667773 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
9 Hb_050847_050 0.0827554952 - - PREDICTED: uncharacterized protein LOC105649140 isoform X1 [Jatropha curcas]
10 Hb_000920_300 0.083067846 - - PREDICTED: flowering time control protein FY isoform X2 [Jatropha curcas]
11 Hb_007472_070 0.0851112385 - - cir, putative [Ricinus communis]
12 Hb_000173_280 0.085837485 - - Speckle-type POZ protein, putative [Ricinus communis]
13 Hb_001671_100 0.0872600747 - - glycine-rich RNA-binding family protein [Populus trichocarpa]
14 Hb_007416_120 0.0875895568 - - arginine/serine-rich splicing factor, putative [Ricinus communis]
15 Hb_000574_450 0.0881110413 - - PREDICTED: signal recognition particle 54 kDa protein 2 [Jatropha curcas]
16 Hb_000521_240 0.0883228013 - - PREDICTED: uncharacterized protein LOC105650339 isoform X2 [Jatropha curcas]
17 Hb_109484_010 0.088775967 - - PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
18 Hb_000504_070 0.08951864 - - PREDICTED: pescadillo homolog isoform X1 [Jatropha curcas]
19 Hb_001221_110 0.089766971 transcription factor TF Family: SWI/SNF-BAF60b hypothetical protein JCGZ_11303 [Jatropha curcas]
20 Hb_010423_030 0.090131308 - - PREDICTED: uncharacterized protein LOC105645584 [Jatropha curcas]

Gene co-expression network

sample Hb_004781_010 Hb_004781_010 Hb_010775_040 Hb_010775_040 Hb_004781_010--Hb_010775_040 Hb_029243_030 Hb_029243_030 Hb_004781_010--Hb_029243_030 Hb_000078_120 Hb_000078_120 Hb_004781_010--Hb_000078_120 Hb_000917_230 Hb_000917_230 Hb_004781_010--Hb_000917_230 Hb_006452_100 Hb_006452_100 Hb_004781_010--Hb_006452_100 Hb_023001_040 Hb_023001_040 Hb_004781_010--Hb_023001_040 Hb_023771_010 Hb_023771_010 Hb_010775_040--Hb_023771_010 Hb_010775_040--Hb_000917_230 Hb_002811_100 Hb_002811_100 Hb_010775_040--Hb_002811_100 Hb_000347_450 Hb_000347_450 Hb_010775_040--Hb_000347_450 Hb_000684_040 Hb_000684_040 Hb_010775_040--Hb_000684_040 Hb_000574_450 Hb_000574_450 Hb_029243_030--Hb_000574_450 Hb_001999_310 Hb_001999_310 Hb_029243_030--Hb_001999_310 Hb_010515_020 Hb_010515_020 Hb_029243_030--Hb_010515_020 Hb_001500_140 Hb_001500_140 Hb_029243_030--Hb_001500_140 Hb_027073_020 Hb_027073_020 Hb_029243_030--Hb_027073_020 Hb_002989_020 Hb_002989_020 Hb_029243_030--Hb_002989_020 Hb_006831_140 Hb_006831_140 Hb_000078_120--Hb_006831_140 Hb_002994_030 Hb_002994_030 Hb_000078_120--Hb_002994_030 Hb_000696_330 Hb_000696_330 Hb_000078_120--Hb_000696_330 Hb_002078_350 Hb_002078_350 Hb_000078_120--Hb_002078_350 Hb_011386_010 Hb_011386_010 Hb_000078_120--Hb_011386_010 Hb_000708_030 Hb_000708_030 Hb_000078_120--Hb_000708_030 Hb_112198_010 Hb_112198_010 Hb_000917_230--Hb_112198_010 Hb_000917_230--Hb_000078_120 Hb_000856_010 Hb_000856_010 Hb_000917_230--Hb_000856_010 Hb_003465_030 Hb_003465_030 Hb_000917_230--Hb_003465_030 Hb_000521_240 Hb_000521_240 Hb_000917_230--Hb_000521_240 Hb_005054_110 Hb_005054_110 Hb_000917_230--Hb_005054_110 Hb_006452_100--Hb_023001_040 Hb_001016_120 Hb_001016_120 Hb_006452_100--Hb_001016_120 Hb_000504_070 Hb_000504_070 Hb_006452_100--Hb_000504_070 Hb_000853_150 Hb_000853_150 Hb_006452_100--Hb_000853_150 Hb_149985_010 Hb_149985_010 Hb_006452_100--Hb_149985_010 Hb_003058_120 Hb_003058_120 Hb_023001_040--Hb_003058_120 Hb_023001_040--Hb_149985_010 Hb_005588_060 Hb_005588_060 Hb_023001_040--Hb_005588_060 Hb_000663_060 Hb_000663_060 Hb_023001_040--Hb_000663_060 Hb_001828_180 Hb_001828_180 Hb_023001_040--Hb_001828_180 Hb_000167_010 Hb_000167_010 Hb_023001_040--Hb_000167_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.61154 10.6995 7.51183 10.6734 4.02928 7.7749
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.91534 12.8099 6.53688 12.5179 8.57143

CAGE analysis