Hb_000856_010

Information

Type -
Description -
Location Contig856: 7817-12027
Sequence    

Annotation

kegg
ID rcu:RCOM_1512970
description hypothetical protein
nr
ID XP_012080172.1
description PREDICTED: uncharacterized protein LOC105640466 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KH81
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11555 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60558: 7842-12017 , PASA_asmbl_60559: 7845-12039
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000856_010 0.0 - - PREDICTED: uncharacterized protein LOC105640466 [Jatropha curcas]
2 Hb_012022_040 0.0437258192 - - Protein SIS1, putative [Ricinus communis]
3 Hb_000928_070 0.0579886671 - - PREDICTED: maltose excess protein 1, chloroplastic-like [Jatropha curcas]
4 Hb_005054_110 0.0656278315 - - PREDICTED: adenylosuccinate lyase-like [Jatropha curcas]
5 Hb_004078_040 0.0682826213 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
6 Hb_000221_190 0.0686759551 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
7 Hb_000359_060 0.06991754 - - PREDICTED: WD repeat-containing protein 26-like [Jatropha curcas]
8 Hb_000917_230 0.0719211971 - - PREDICTED: coiled-coil domain-containing protein 130-like [Jatropha curcas]
9 Hb_004324_090 0.0720207942 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
10 Hb_149985_010 0.0728838334 - - PREDICTED: transcription initiation factor IIB-2 [Cucumis sativus]
11 Hb_000487_270 0.0732812539 - - hypothetical protein JCGZ_22651 [Jatropha curcas]
12 Hb_000049_210 0.0738864246 - - PREDICTED: uncharacterized protein LOC105644460 [Jatropha curcas]
13 Hb_001278_100 0.0747523758 - - PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Jatropha curcas]
14 Hb_019863_070 0.0752876096 - - PREDICTED: regulatory-associated protein of TOR 1 isoform X1 [Jatropha curcas]
15 Hb_000310_020 0.0758035906 - - hypothetical protein JCGZ_20797 [Jatropha curcas]
16 Hb_000614_250 0.0764210414 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
17 Hb_002450_020 0.0773458437 - - PREDICTED: probable transcriptional regulator SLK2 [Jatropha curcas]
18 Hb_089032_030 0.0779324755 - - PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like [Jatropha curcas]
19 Hb_000890_150 0.0779713469 - - PREDICTED: E3 ubiquitin-protein ligase Topors isoform X1 [Jatropha curcas]
20 Hb_000340_180 0.0786853265 - - PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000856_010 Hb_000856_010 Hb_012022_040 Hb_012022_040 Hb_000856_010--Hb_012022_040 Hb_000928_070 Hb_000928_070 Hb_000856_010--Hb_000928_070 Hb_005054_110 Hb_005054_110 Hb_000856_010--Hb_005054_110 Hb_004078_040 Hb_004078_040 Hb_000856_010--Hb_004078_040 Hb_000221_190 Hb_000221_190 Hb_000856_010--Hb_000221_190 Hb_000359_060 Hb_000359_060 Hb_000856_010--Hb_000359_060 Hb_001278_100 Hb_001278_100 Hb_012022_040--Hb_001278_100 Hb_004109_220 Hb_004109_220 Hb_012022_040--Hb_004109_220 Hb_149985_010 Hb_149985_010 Hb_012022_040--Hb_149985_010 Hb_012022_040--Hb_000221_190 Hb_012022_040--Hb_000928_070 Hb_001541_120 Hb_001541_120 Hb_000928_070--Hb_001541_120 Hb_000288_030 Hb_000288_030 Hb_000928_070--Hb_000288_030 Hb_003582_060 Hb_003582_060 Hb_000928_070--Hb_003582_060 Hb_000140_090 Hb_000140_090 Hb_000928_070--Hb_000140_090 Hb_011386_010 Hb_011386_010 Hb_005054_110--Hb_011386_010 Hb_000049_210 Hb_000049_210 Hb_005054_110--Hb_000049_210 Hb_000260_350 Hb_000260_350 Hb_005054_110--Hb_000260_350 Hb_005054_110--Hb_149985_010 Hb_019863_070 Hb_019863_070 Hb_005054_110--Hb_019863_070 Hb_001304_110 Hb_001304_110 Hb_005054_110--Hb_001304_110 Hb_004078_040--Hb_000359_060 Hb_000393_020 Hb_000393_020 Hb_004078_040--Hb_000393_020 Hb_000173_410 Hb_000173_410 Hb_004078_040--Hb_000173_410 Hb_004078_040--Hb_004109_220 Hb_000454_090 Hb_000454_090 Hb_004078_040--Hb_000454_090 Hb_004078_040--Hb_000928_070 Hb_000221_190--Hb_003582_060 Hb_000310_020 Hb_000310_020 Hb_000221_190--Hb_000310_020 Hb_000505_130 Hb_000505_130 Hb_000221_190--Hb_000505_130 Hb_006615_240 Hb_006615_240 Hb_000221_190--Hb_006615_240 Hb_000221_190--Hb_001278_100 Hb_000890_150 Hb_000890_150 Hb_000359_060--Hb_000890_150 Hb_000220_100 Hb_000220_100 Hb_000359_060--Hb_000220_100 Hb_011218_090 Hb_011218_090 Hb_000359_060--Hb_011218_090 Hb_000359_060--Hb_149985_010 Hb_168978_010 Hb_168978_010 Hb_000359_060--Hb_168978_010 Hb_000359_060--Hb_000173_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.34014 14.0755 9.95734 16.9087 8.39561 10.143
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.4436 20.7202 16.7746 11.0954 14.5736

CAGE analysis