Hb_004718_040

Information

Type -
Description -
Location Contig4718: 96683-98933
Sequence    

Annotation

kegg
ID rcu:RCOM_0803520
description hypothetical protein
nr
ID XP_012077472.1
description PREDICTED: uncharacterized protein LOC105638292 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KDG5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07807 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004718_040 0.0 - - PREDICTED: uncharacterized protein LOC105638292 [Jatropha curcas]
2 Hb_000521_160 0.1204965378 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002518_030 0.1206591471 - - PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 3 isoform X1 [Populus euphratica]
4 Hb_002232_100 0.1240001936 - - vacuolar ATPase F subunit [Hevea brasiliensis]
5 Hb_001124_020 0.1253748373 - - PREDICTED: protein yippee-like At4g27745 [Jatropha curcas]
6 Hb_000080_060 0.1271000031 - - RNA polymerase I, II and III subunit RPB8, partial [Manihot esculenta]
7 Hb_000453_160 0.1306601065 - - vacuolar protein sorting 26, vps26, putative [Ricinus communis]
8 Hb_003536_110 0.1324939784 - - PREDICTED: probable small nuclear ribonucleoprotein F [Jatropha curcas]
9 Hb_000025_630 0.1373660993 - - PREDICTED: uncharacterized protein LOC105635952 [Jatropha curcas]
10 Hb_000107_200 0.139692829 - - hypothetical protein B456_005G214800 [Gossypium raimondii]
11 Hb_106411_010 0.141654475 - - Ribosomal protein S25 family protein [Theobroma cacao]
12 Hb_008643_040 0.1433635123 - - PREDICTED: jacalin-related lectin 3-like [Jatropha curcas]
13 Hb_001699_040 0.143899249 - - PREDICTED: uncharacterized protein LOC105636529 isoform X2 [Jatropha curcas]
14 Hb_034506_010 0.1439639474 - - PREDICTED: protein OS-9 homolog [Jatropha curcas]
15 Hb_000606_080 0.1443158032 - - PREDICTED: RNA-binding protein Nova-2-like [Malus domestica]
16 Hb_008092_040 0.144879055 - - PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like [Jatropha curcas]
17 Hb_000676_080 0.1449540116 - - PREDICTED: uncharacterized WD repeat-containing protein C17D11.16 [Jatropha curcas]
18 Hb_143398_010 0.1455824447 - - PREDICTED: peter Pan-like protein [Jatropha curcas]
19 Hb_001699_100 0.1468186284 - - PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
20 Hb_003925_070 0.1471408113 - - ATOZI1, putative [Ricinus communis]

Gene co-expression network

sample Hb_004718_040 Hb_004718_040 Hb_000521_160 Hb_000521_160 Hb_004718_040--Hb_000521_160 Hb_002518_030 Hb_002518_030 Hb_004718_040--Hb_002518_030 Hb_002232_100 Hb_002232_100 Hb_004718_040--Hb_002232_100 Hb_001124_020 Hb_001124_020 Hb_004718_040--Hb_001124_020 Hb_000080_060 Hb_000080_060 Hb_004718_040--Hb_000080_060 Hb_000453_160 Hb_000453_160 Hb_004718_040--Hb_000453_160 Hb_000521_160--Hb_002518_030 Hb_012796_020 Hb_012796_020 Hb_000521_160--Hb_012796_020 Hb_002298_030 Hb_002298_030 Hb_000521_160--Hb_002298_030 Hb_003929_270 Hb_003929_270 Hb_000521_160--Hb_003929_270 Hb_000167_080 Hb_000167_080 Hb_000521_160--Hb_000167_080 Hb_000521_160--Hb_000453_160 Hb_000170_200 Hb_000170_200 Hb_002518_030--Hb_000170_200 Hb_000975_190 Hb_000975_190 Hb_002518_030--Hb_000975_190 Hb_001699_040 Hb_001699_040 Hb_002518_030--Hb_001699_040 Hb_002518_030--Hb_000453_160 Hb_013726_020 Hb_013726_020 Hb_002518_030--Hb_013726_020 Hb_010457_030 Hb_010457_030 Hb_002232_100--Hb_010457_030 Hb_007904_200 Hb_007904_200 Hb_002232_100--Hb_007904_200 Hb_011671_240 Hb_011671_240 Hb_002232_100--Hb_011671_240 Hb_000451_010 Hb_000451_010 Hb_002232_100--Hb_000451_010 Hb_000010_330 Hb_000010_330 Hb_002232_100--Hb_000010_330 Hb_002506_020 Hb_002506_020 Hb_002232_100--Hb_002506_020 Hb_001124_020--Hb_012796_020 Hb_082821_010 Hb_082821_010 Hb_001124_020--Hb_082821_010 Hb_001699_100 Hb_001699_100 Hb_001124_020--Hb_001699_100 Hb_001633_130 Hb_001633_130 Hb_001124_020--Hb_001633_130 Hb_001575_070 Hb_001575_070 Hb_001124_020--Hb_001575_070 Hb_004466_040 Hb_004466_040 Hb_001124_020--Hb_004466_040 Hb_004545_060 Hb_004545_060 Hb_000080_060--Hb_004545_060 Hb_010180_010 Hb_010180_010 Hb_000080_060--Hb_010180_010 Hb_004944_010 Hb_004944_010 Hb_000080_060--Hb_004944_010 Hb_143398_010 Hb_143398_010 Hb_000080_060--Hb_143398_010 Hb_012008_020 Hb_012008_020 Hb_000080_060--Hb_012008_020 Hb_000045_090 Hb_000045_090 Hb_000080_060--Hb_000045_090 Hb_002053_140 Hb_002053_140 Hb_000453_160--Hb_002053_140 Hb_000453_160--Hb_000167_080 Hb_000453_160--Hb_001699_100 Hb_000783_010 Hb_000783_010 Hb_000453_160--Hb_000783_010 Hb_005489_060 Hb_005489_060 Hb_000453_160--Hb_005489_060 Hb_000453_160--Hb_001633_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.678208 0.151148 0.389428 0.840671 0.316155 0.912506
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.342163 0.559125 0.391116 0.231013 0.130716

CAGE analysis