Hb_004525_080

Information

Type -
Description -
Location Contig4525: 43472-44090
Sequence    

Annotation

kegg
ID pvu:PHAVU_003G2541001
description hypothetical protein
nr
ID XP_010102089.1
description Sugar transporter ERD6-like 6 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9RHN0
description Sugar transporter ERD6-like 6 OS=Morus notabilis GN=L484_009032 PE=4 SV=1
Gene Ontology
ID GO:0016021
description sugar transporter erd6-like 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43222: 22185-44706 , PASA_asmbl_43223: 42741-42845
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004525_080 0.0 - - Sugar transporter ERD6-like 6 [Morus notabilis]
2 Hb_066514_010 0.1699767682 - - hypothetical protein RCOM_0204720 [Ricinus communis]
3 Hb_007575_090 0.1711322733 - - putative. proteolipid subunit of vacuolar H+ ATPase, partial [Zea mays]
4 Hb_002900_100 0.1815139035 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Jatropha curcas]
5 Hb_001486_050 0.1830406524 - - PREDICTED: arabinogalactan peptide 13-like [Jatropha curcas]
6 Hb_007441_090 0.1855784704 - - nucleoside diphosphate kinase 1 [Hevea brasiliensis]
7 Hb_177152_010 0.1960650353 - - glycosyl hydrolase family 38 family protein [Populus trichocarpa]
8 Hb_008054_050 0.1964007532 - - PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]
9 Hb_184541_010 0.1975387309 - - PREDICTED: selT-like protein [Jatropha curcas]
10 Hb_011287_040 0.2024640961 - - PREDICTED: OTU domain-containing protein At3g57810-like isoform X1 [Jatropha curcas]
11 Hb_001474_040 0.2039768158 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
12 Hb_008185_020 0.208286292 - - RING-H2 finger protein ATL3J, putative [Ricinus communis]
13 Hb_054541_010 0.209502452 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
14 Hb_011918_010 0.2123965631 - - hypothetical protein glysoja_041948 [Glycine soja]
15 Hb_099990_020 0.2192283314 - - hypothetical protein POPTR_0006s28940g [Populus trichocarpa]
16 Hb_007741_090 0.2228611186 - - Autophagy-related 8f -like protein [Gossypium arboreum]
17 Hb_000311_030 0.2230272209 - - hypothetical protein B456_002G227600 [Gossypium raimondii]
18 Hb_017014_020 0.2239974015 - - -
19 Hb_000099_190 0.2240643745 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
20 Hb_188313_010 0.2264442646 - - PREDICTED: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog [Jatropha curcas]

Gene co-expression network

sample Hb_004525_080 Hb_004525_080 Hb_066514_010 Hb_066514_010 Hb_004525_080--Hb_066514_010 Hb_007575_090 Hb_007575_090 Hb_004525_080--Hb_007575_090 Hb_002900_100 Hb_002900_100 Hb_004525_080--Hb_002900_100 Hb_001486_050 Hb_001486_050 Hb_004525_080--Hb_001486_050 Hb_007441_090 Hb_007441_090 Hb_004525_080--Hb_007441_090 Hb_177152_010 Hb_177152_010 Hb_004525_080--Hb_177152_010 Hb_066514_010--Hb_002900_100 Hb_011918_010 Hb_011918_010 Hb_066514_010--Hb_011918_010 Hb_066514_010--Hb_007441_090 Hb_002490_030 Hb_002490_030 Hb_066514_010--Hb_002490_030 Hb_118507_010 Hb_118507_010 Hb_066514_010--Hb_118507_010 Hb_000302_100 Hb_000302_100 Hb_066514_010--Hb_000302_100 Hb_007575_090--Hb_011918_010 Hb_007741_090 Hb_007741_090 Hb_007575_090--Hb_007741_090 Hb_007575_090--Hb_066514_010 Hb_007575_090--Hb_002900_100 Hb_000302_110 Hb_000302_110 Hb_007575_090--Hb_000302_110 Hb_004117_330 Hb_004117_330 Hb_007575_090--Hb_004117_330 Hb_002900_100--Hb_002490_030 Hb_000816_190 Hb_000816_190 Hb_002900_100--Hb_000816_190 Hb_002675_090 Hb_002675_090 Hb_002900_100--Hb_002675_090 Hb_002900_100--Hb_011918_010 Hb_006907_050 Hb_006907_050 Hb_002900_100--Hb_006907_050 Hb_184541_010 Hb_184541_010 Hb_001486_050--Hb_184541_010 Hb_001486_050--Hb_007741_090 Hb_001486_050--Hb_007575_090 Hb_000139_110 Hb_000139_110 Hb_001486_050--Hb_000139_110 Hb_006816_110 Hb_006816_110 Hb_001486_050--Hb_006816_110 Hb_106688_010 Hb_106688_010 Hb_007441_090--Hb_106688_010 Hb_165402_010 Hb_165402_010 Hb_007441_090--Hb_165402_010 Hb_018691_010 Hb_018691_010 Hb_007441_090--Hb_018691_010 Hb_017159_010 Hb_017159_010 Hb_007441_090--Hb_017159_010 Hb_001708_010 Hb_001708_010 Hb_007441_090--Hb_001708_010 Hb_013358_100 Hb_013358_100 Hb_177152_010--Hb_013358_100 Hb_145317_010 Hb_145317_010 Hb_177152_010--Hb_145317_010 Hb_169329_010 Hb_169329_010 Hb_177152_010--Hb_169329_010 Hb_035436_010 Hb_035436_010 Hb_177152_010--Hb_035436_010 Hb_065841_010 Hb_065841_010 Hb_177152_010--Hb_065841_010 Hb_178620_010 Hb_178620_010 Hb_177152_010--Hb_178620_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.3186 35.2537 47.2287 284.94 31.4872 73.4658
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.49371 11.8936 2.91289 15.9443 10.8467

CAGE analysis