Hb_004374_120

Information

Type -
Description -
Location Contig4374: 113263-117268
Sequence    

Annotation

kegg
ID pop:POPTR_0001s09710g
description POPTRDRAFT_1066853; hypothetical protein
nr
ID KDP25402.1
description hypothetical protein JCGZ_20558 [Jatropha curcas]
swissprot
ID Q9CAJ9
description BTB/POZ domain-containing protein At1g63850 OS=Arabidopsis thaliana GN=At1g63850 PE=1 SV=1
trembl
ID A0A067JNE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20558 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004374_120 0.0 - - hypothetical protein JCGZ_20558 [Jatropha curcas]
2 Hb_005550_010 0.1659936549 - - PREDICTED: 3-ketoacyl-CoA synthase 4-like [Jatropha curcas]
3 Hb_001170_030 0.1810473109 - - synaptonemal complex protein, putative [Ricinus communis]
4 Hb_011512_130 0.185364475 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
5 Hb_007904_130 0.2030381027 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
6 Hb_000076_140 0.2032579131 - - PREDICTED: glucose-6-phosphate/phosphate translocator 1, chloroplastic isoform X1 [Jatropha curcas]
7 Hb_003090_100 0.2034822426 - - PREDICTED: uncharacterized protein LOC105646670 [Jatropha curcas]
8 Hb_008221_170 0.2058108298 transcription factor TF Family: BES1 PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Populus euphratica]
9 Hb_146051_010 0.2063299047 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
10 Hb_002631_200 0.2078511496 - - PREDICTED: uncharacterized protein LOC105646171 isoform X2 [Jatropha curcas]
11 Hb_001642_070 0.2082476056 - - PREDICTED: uncharacterized protein LOC105646431 [Jatropha curcas]
12 Hb_009193_100 0.2091499956 - - hypothetical protein JCGZ_15709 [Jatropha curcas]
13 Hb_002153_030 0.2120973304 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
14 Hb_001053_090 0.2127529862 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 30-like [Jatropha curcas]
15 Hb_004846_160 0.2136953366 - - -
16 Hb_007590_070 0.2142354341 - - PREDICTED: inositol 3-kinase [Jatropha curcas]
17 Hb_000126_110 0.22223895 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X3 [Populus euphratica]
18 Hb_108329_020 0.223889402 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
19 Hb_134469_010 0.224473364 - - PREDICTED: protein argonaute 5 isoform X1 [Jatropha curcas]
20 Hb_007044_050 0.2255354176 - - PREDICTED: putative endo-1,3(4)-beta-glucanase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_004374_120 Hb_004374_120 Hb_005550_010 Hb_005550_010 Hb_004374_120--Hb_005550_010 Hb_001170_030 Hb_001170_030 Hb_004374_120--Hb_001170_030 Hb_011512_130 Hb_011512_130 Hb_004374_120--Hb_011512_130 Hb_007904_130 Hb_007904_130 Hb_004374_120--Hb_007904_130 Hb_000076_140 Hb_000076_140 Hb_004374_120--Hb_000076_140 Hb_003090_100 Hb_003090_100 Hb_004374_120--Hb_003090_100 Hb_008246_020 Hb_008246_020 Hb_005550_010--Hb_008246_020 Hb_005550_010--Hb_011512_130 Hb_000120_230 Hb_000120_230 Hb_005550_010--Hb_000120_230 Hb_000792_040 Hb_000792_040 Hb_005550_010--Hb_000792_040 Hb_111051_010 Hb_111051_010 Hb_005550_010--Hb_111051_010 Hb_002631_200 Hb_002631_200 Hb_005550_010--Hb_002631_200 Hb_001642_070 Hb_001642_070 Hb_001170_030--Hb_001642_070 Hb_002908_050 Hb_002908_050 Hb_001170_030--Hb_002908_050 Hb_010863_010 Hb_010863_010 Hb_001170_030--Hb_010863_010 Hb_001170_030--Hb_007904_130 Hb_000025_790 Hb_000025_790 Hb_001170_030--Hb_000025_790 Hb_000614_240 Hb_000614_240 Hb_001170_030--Hb_000614_240 Hb_008066_070 Hb_008066_070 Hb_011512_130--Hb_008066_070 Hb_011512_130--Hb_002631_200 Hb_002217_220 Hb_002217_220 Hb_011512_130--Hb_002217_220 Hb_005433_060 Hb_005433_060 Hb_011512_130--Hb_005433_060 Hb_008221_170 Hb_008221_170 Hb_011512_130--Hb_008221_170 Hb_000402_190 Hb_000402_190 Hb_007904_130--Hb_000402_190 Hb_007904_130--Hb_010863_010 Hb_007904_130--Hb_001642_070 Hb_003544_030 Hb_003544_030 Hb_007904_130--Hb_003544_030 Hb_002153_030 Hb_002153_030 Hb_007904_130--Hb_002153_030 Hb_004607_050 Hb_004607_050 Hb_000076_140--Hb_004607_050 Hb_000340_390 Hb_000340_390 Hb_000076_140--Hb_000340_390 Hb_000999_050 Hb_000999_050 Hb_000076_140--Hb_000999_050 Hb_003370_050 Hb_003370_050 Hb_000076_140--Hb_003370_050 Hb_001268_110 Hb_001268_110 Hb_000076_140--Hb_001268_110 Hb_001898_080 Hb_001898_080 Hb_000076_140--Hb_001898_080 Hb_003090_100--Hb_007904_130 Hb_001840_090 Hb_001840_090 Hb_003090_100--Hb_001840_090 Hb_003090_100--Hb_003544_030 Hb_003090_100--Hb_001642_070 Hb_083799_010 Hb_083799_010 Hb_003090_100--Hb_083799_010 Hb_000600_060 Hb_000600_060 Hb_003090_100--Hb_000600_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0987098 0.146395 0.00980926 0.181545 0.0502575 0.0262732
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.060061 0.0236262 0.222229 0.273364 0.0989928

CAGE analysis