Hb_002805_260

Information

Type -
Description -
Location Contig2805: 221068-221847
Sequence    

Annotation

kegg
ID rcu:RCOM_1037480
description hypothetical protein
nr
ID XP_002513975.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RJQ6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1037480 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002805_260 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_007654_010 0.1171877318 - - valacyclovir hydrolase, putative [Ricinus communis]
3 Hb_027028_010 0.1299407363 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
4 Hb_028013_030 0.135727228 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_003119_120 0.1481422321 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Nicotiana sylvestris]
6 Hb_173764_010 0.148813344 - - protein binding protein, putative [Ricinus communis]
7 Hb_001890_040 0.152200105 - - receptor-kinase, putative [Ricinus communis]
8 Hb_000552_030 0.1600962925 - - glucose-6-phosphate 1-dehydrogenase, putative [Ricinus communis]
9 Hb_001476_030 0.1706266006 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
10 Hb_007451_080 0.1775493478 transcription factor TF Family: NF-YB ccaat-binding transcription factor subunit A, putative [Ricinus communis]
11 Hb_003549_010 0.1791713494 - - PREDICTED: uncharacterized protein LOC105647434 [Jatropha curcas]
12 Hb_000321_040 0.1838858217 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
13 Hb_007017_110 0.1893063279 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
14 Hb_002081_220 0.1896618213 - - PREDICTED: uncharacterized protein LOC103707552 [Phoenix dactylifera]
15 Hb_000431_140 0.1939694291 - - PREDICTED: acetolactate synthase 1, chloroplastic-like [Vitis vinifera]
16 Hb_007951_080 0.1993951415 - - lactoylglutathione lyase, putative [Ricinus communis]
17 Hb_000679_280 0.2006845411 - - hypothetical protein POPTR_0006s27120g [Populus trichocarpa]
18 Hb_007645_110 0.2059967715 transcription factor TF Family: ERF hypothetical protein RCOM_0089590 [Ricinus communis]
19 Hb_000175_210 0.2094067264 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
20 Hb_021943_010 0.2136943911 - - -

Gene co-expression network

sample Hb_002805_260 Hb_002805_260 Hb_007654_010 Hb_007654_010 Hb_002805_260--Hb_007654_010 Hb_027028_010 Hb_027028_010 Hb_002805_260--Hb_027028_010 Hb_028013_030 Hb_028013_030 Hb_002805_260--Hb_028013_030 Hb_003119_120 Hb_003119_120 Hb_002805_260--Hb_003119_120 Hb_173764_010 Hb_173764_010 Hb_002805_260--Hb_173764_010 Hb_001890_040 Hb_001890_040 Hb_002805_260--Hb_001890_040 Hb_007645_110 Hb_007645_110 Hb_007654_010--Hb_007645_110 Hb_007017_110 Hb_007017_110 Hb_007654_010--Hb_007017_110 Hb_007451_080 Hb_007451_080 Hb_007654_010--Hb_007451_080 Hb_004316_160 Hb_004316_160 Hb_007654_010--Hb_004316_160 Hb_007951_080 Hb_007951_080 Hb_007654_010--Hb_007951_080 Hb_027028_010--Hb_003119_120 Hb_003549_010 Hb_003549_010 Hb_027028_010--Hb_003549_010 Hb_000679_280 Hb_000679_280 Hb_027028_010--Hb_000679_280 Hb_000552_030 Hb_000552_030 Hb_027028_010--Hb_000552_030 Hb_027028_010--Hb_173764_010 Hb_028013_030--Hb_001890_040 Hb_006120_140 Hb_006120_140 Hb_028013_030--Hb_006120_140 Hb_020273_020 Hb_020273_020 Hb_028013_030--Hb_020273_020 Hb_000321_040 Hb_000321_040 Hb_028013_030--Hb_000321_040 Hb_000175_210 Hb_000175_210 Hb_028013_030--Hb_000175_210 Hb_000621_100 Hb_000621_100 Hb_028013_030--Hb_000621_100 Hb_003119_120--Hb_003549_010 Hb_003119_120--Hb_000679_280 Hb_000057_210 Hb_000057_210 Hb_003119_120--Hb_000057_210 Hb_003119_120--Hb_000552_030 Hb_003119_120--Hb_173764_010 Hb_173764_010--Hb_000552_030 Hb_000128_050 Hb_000128_050 Hb_173764_010--Hb_000128_050 Hb_002081_190 Hb_002081_190 Hb_173764_010--Hb_002081_190 Hb_173764_010--Hb_003549_010 Hb_173764_010--Hb_000679_280 Hb_002498_290 Hb_002498_290 Hb_173764_010--Hb_002498_290 Hb_001890_040--Hb_006120_140 Hb_001890_040--Hb_020273_020 Hb_001890_040--Hb_000321_040 Hb_001890_040--Hb_000175_210 Hb_000000_040 Hb_000000_040 Hb_001890_040--Hb_000000_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0331543 1.00461 0.109482 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.466622 0

CAGE analysis