Hb_002485_010

Information

Type -
Description -
Location Contig2485: 29746-31197
Sequence    

Annotation

kegg
ID pop:POPTR_0008s08240g
description hypothetical protein
nr
ID XP_012068530.1
description PREDICTED: extensin [Jatropha curcas]
swissprot
ID Q9FZ86
description PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1
trembl
ID A0A067KXQ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03792 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002485_010 0.0 - - PREDICTED: extensin [Jatropha curcas]
2 Hb_001486_280 0.08920062 - - hypothetical protein RCOM_1321910 [Ricinus communis]
3 Hb_003032_030 0.095398337 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
4 Hb_001032_020 0.0967213791 - - ankyrin repeat protein [Bruguiera gymnorhiza]
5 Hb_009023_010 0.105346399 - - glycosyl hydrolase family 31 family protein [Populus trichocarpa]
6 Hb_000345_550 0.106615476 - - PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]
7 Hb_000270_380 0.1082291039 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
8 Hb_012098_160 0.1106308306 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
9 Hb_015561_010 0.1137505881 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000620_040 0.1139339135 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
11 Hb_005784_010 0.1156510754 - - PREDICTED: uncharacterized protein LOC105645175 [Jatropha curcas]
12 Hb_001951_080 0.1165461978 - - O-acetyltransferase, putative [Ricinus communis]
13 Hb_005762_010 0.1194934929 - - PREDICTED: protein CHUP1, chloroplastic-like [Populus euphratica]
14 Hb_000617_330 0.1199077804 - - PREDICTED: uncharacterized protein LOC105647507 [Jatropha curcas]
15 Hb_002999_070 0.1220636489 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
16 Hb_001289_010 0.1229197151 - - PREDICTED: chaperone protein ClpB4, mitochondrial [Vitis vinifera]
17 Hb_001512_130 0.1255523027 - - PREDICTED: uncharacterized protein LOC105633633 [Jatropha curcas]
18 Hb_009783_010 0.1260068061 - - PREDICTED: sulfated surface glycoprotein 185-like [Populus euphratica]
19 Hb_003893_130 0.1280829179 - - metal ion binding protein, putative [Ricinus communis]
20 Hb_007904_280 0.1290679449 - - PREDICTED: uncharacterized protein LOC105644987 [Jatropha curcas]

Gene co-expression network

sample Hb_002485_010 Hb_002485_010 Hb_001486_280 Hb_001486_280 Hb_002485_010--Hb_001486_280 Hb_003032_030 Hb_003032_030 Hb_002485_010--Hb_003032_030 Hb_001032_020 Hb_001032_020 Hb_002485_010--Hb_001032_020 Hb_009023_010 Hb_009023_010 Hb_002485_010--Hb_009023_010 Hb_000345_550 Hb_000345_550 Hb_002485_010--Hb_000345_550 Hb_000270_380 Hb_000270_380 Hb_002485_010--Hb_000270_380 Hb_001486_280--Hb_000270_380 Hb_012098_160 Hb_012098_160 Hb_001486_280--Hb_012098_160 Hb_001486_280--Hb_009023_010 Hb_000904_120 Hb_000904_120 Hb_001486_280--Hb_000904_120 Hb_012484_050 Hb_012484_050 Hb_001486_280--Hb_012484_050 Hb_000620_040 Hb_000620_040 Hb_003032_030--Hb_000620_040 Hb_015934_090 Hb_015934_090 Hb_003032_030--Hb_015934_090 Hb_147006_010 Hb_147006_010 Hb_003032_030--Hb_147006_010 Hb_020375_010 Hb_020375_010 Hb_003032_030--Hb_020375_010 Hb_003032_030--Hb_009023_010 Hb_000749_300 Hb_000749_300 Hb_003032_030--Hb_000749_300 Hb_001674_010 Hb_001674_010 Hb_001032_020--Hb_001674_010 Hb_008054_030 Hb_008054_030 Hb_001032_020--Hb_008054_030 Hb_002066_110 Hb_002066_110 Hb_001032_020--Hb_002066_110 Hb_001032_020--Hb_012098_160 Hb_007163_100 Hb_007163_100 Hb_001032_020--Hb_007163_100 Hb_015561_010 Hb_015561_010 Hb_001032_020--Hb_015561_010 Hb_009023_010--Hb_000270_380 Hb_009023_010--Hb_015561_010 Hb_005762_010 Hb_005762_010 Hb_009023_010--Hb_005762_010 Hb_002062_010 Hb_002062_010 Hb_009023_010--Hb_002062_010 Hb_009023_010--Hb_012098_160 Hb_001512_130 Hb_001512_130 Hb_009023_010--Hb_001512_130 Hb_005784_010 Hb_005784_010 Hb_000345_550--Hb_005784_010 Hb_009785_030 Hb_009785_030 Hb_000345_550--Hb_009785_030 Hb_001951_080 Hb_001951_080 Hb_000345_550--Hb_001951_080 Hb_009783_010 Hb_009783_010 Hb_000345_550--Hb_009783_010 Hb_000345_550--Hb_009023_010 Hb_007904_280 Hb_007904_280 Hb_000345_550--Hb_007904_280 Hb_000270_380--Hb_012098_160 Hb_000270_380--Hb_015561_010 Hb_000270_380--Hb_001512_130 Hb_000336_290 Hb_000336_290 Hb_000270_380--Hb_000336_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.157299 0.462585 0.871261 0.0467974 0.0212602
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0175173 0.619427

CAGE analysis