Hb_001726_030

Information

Type -
Description -
Location Contig1726: 58311-60246
Sequence    

Annotation

kegg
ID tcc:TCM_006794
description Ferulic acid 5-hydroxylase 1
nr
ID XP_007042040.1
description Ferulic acid 5-hydroxylase 1 [Theobroma cacao]
swissprot
ID Q42600
description Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=1 SV=1
trembl
ID A0A061E0L2
description Ferulic acid 5-hydroxylase 1 OS=Theobroma cacao GN=TCM_006794 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 84a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001726_030 0.0 - - Ferulic acid 5-hydroxylase 1 [Theobroma cacao]
2 Hb_125644_010 0.1961500121 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
3 Hb_176979_010 0.1992004257 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
4 Hb_064885_050 0.2304927125 - - PREDICTED: BAHD acyltransferase At5g47980-like [Populus euphratica]
5 Hb_008092_090 0.2365387931 - - PREDICTED: uncharacterized protein LOC105637756 [Jatropha curcas]
6 Hb_005218_040 0.2404872994 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
7 Hb_020025_020 0.2437851516 - - SENESCENCE-RELATED GENE 1 family protein [Populus trichocarpa]
8 Hb_030291_030 0.2454359834 - - PREDICTED: agmatine coumaroyltransferase-2-like [Jatropha curcas]
9 Hb_146023_010 0.2481188838 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_001047_250 0.2526771994 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
11 Hb_002551_010 0.2535483188 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_000264_250 0.2536581247 - - thioredoxin family protein [Arabidopsis thaliana]
13 Hb_106528_010 0.2538170456 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
14 Hb_005747_040 0.2538901009 - - PREDICTED: peroxidase N1-like, partial [Nicotiana sylvestris]
15 Hb_001514_080 0.2539577686 - - hypothetical protein JCGZ_16082 [Jatropha curcas]
16 Hb_000563_070 0.2541818894 - - PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Sesamum indicum]
17 Hb_008643_010 0.2545130926 - - hypothetical protein JCGZ_04298 [Jatropha curcas]
18 Hb_005747_020 0.2553360118 - - bacterial-induced peroxidase [Gossypium schwendimanii]
19 Hb_001114_290 0.2555098215 - - conserved hypothetical protein [Ricinus communis]
20 Hb_094462_010 0.257412041 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]

Gene co-expression network

sample Hb_001726_030 Hb_001726_030 Hb_125644_010 Hb_125644_010 Hb_001726_030--Hb_125644_010 Hb_176979_010 Hb_176979_010 Hb_001726_030--Hb_176979_010 Hb_064885_050 Hb_064885_050 Hb_001726_030--Hb_064885_050 Hb_008092_090 Hb_008092_090 Hb_001726_030--Hb_008092_090 Hb_005218_040 Hb_005218_040 Hb_001726_030--Hb_005218_040 Hb_020025_020 Hb_020025_020 Hb_001726_030--Hb_020025_020 Hb_125644_010--Hb_176979_010 Hb_115007_010 Hb_115007_010 Hb_125644_010--Hb_115007_010 Hb_007342_020 Hb_007342_020 Hb_125644_010--Hb_007342_020 Hb_146023_010 Hb_146023_010 Hb_125644_010--Hb_146023_010 Hb_000537_120 Hb_000537_120 Hb_125644_010--Hb_000537_120 Hb_064398_010 Hb_064398_010 Hb_125644_010--Hb_064398_010 Hb_176979_010--Hb_146023_010 Hb_176979_010--Hb_064885_050 Hb_002917_010 Hb_002917_010 Hb_176979_010--Hb_002917_010 Hb_001442_080 Hb_001442_080 Hb_176979_010--Hb_001442_080 Hb_000939_030 Hb_000939_030 Hb_176979_010--Hb_000939_030 Hb_064885_050--Hb_146023_010 Hb_064885_050--Hb_000939_030 Hb_009230_040 Hb_009230_040 Hb_064885_050--Hb_009230_040 Hb_011856_010 Hb_011856_010 Hb_064885_050--Hb_011856_010 Hb_139460_010 Hb_139460_010 Hb_064885_050--Hb_139460_010 Hb_004592_020 Hb_004592_020 Hb_008092_090--Hb_004592_020 Hb_028013_010 Hb_028013_010 Hb_008092_090--Hb_028013_010 Hb_001675_210 Hb_001675_210 Hb_008092_090--Hb_001675_210 Hb_012652_020 Hb_012652_020 Hb_008092_090--Hb_012652_020 Hb_000419_080 Hb_000419_080 Hb_008092_090--Hb_000419_080 Hb_094462_010 Hb_094462_010 Hb_008092_090--Hb_094462_010 Hb_000455_100 Hb_000455_100 Hb_005218_040--Hb_000455_100 Hb_008643_010 Hb_008643_010 Hb_005218_040--Hb_008643_010 Hb_000007_110 Hb_000007_110 Hb_005218_040--Hb_000007_110 Hb_008779_010 Hb_008779_010 Hb_005218_040--Hb_008779_010 Hb_005218_040--Hb_176979_010 Hb_000589_280 Hb_000589_280 Hb_020025_020--Hb_000589_280 Hb_100786_010 Hb_100786_010 Hb_020025_020--Hb_100786_010 Hb_010839_040 Hb_010839_040 Hb_020025_020--Hb_010839_040 Hb_000462_100 Hb_000462_100 Hb_020025_020--Hb_000462_100 Hb_002835_030 Hb_002835_030 Hb_020025_020--Hb_002835_030 Hb_002758_020 Hb_002758_020 Hb_020025_020--Hb_002758_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0345852 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0440058 0.279866 0

CAGE analysis