Hb_094462_010

Information

Type -
Description -
Location Contig94462: 652-1074
Sequence    

Annotation

kegg
ID pop:POPTR_0014s19755g
description hypothetical protein
nr
ID KDO39741.1
description hypothetical protein CISIN_1g033698mg [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067DMC2
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033698mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094462_010 0.0 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]
2 Hb_000563_070 0.0272670922 - - PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Sesamum indicum]
3 Hb_000022_270 0.0333720512 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003685_060 0.035918546 - - PREDICTED: laccase-15 [Jatropha curcas]
5 Hb_000264_250 0.0378113699 - - thioredoxin family protein [Arabidopsis thaliana]
6 Hb_000419_080 0.0386968395 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
7 Hb_001604_140 0.038745609 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
8 Hb_005747_020 0.0397583215 - - bacterial-induced peroxidase [Gossypium schwendimanii]
9 Hb_000201_080 0.0434265257 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_001032_060 0.0473707953 - - PREDICTED: ankyrin-2-like [Citrus sinensis]
11 Hb_126040_020 0.0484032733 - - -
12 Hb_002551_010 0.0486526469 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_106528_010 0.058293035 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
14 Hb_005747_040 0.0597978253 - - PREDICTED: peroxidase N1-like, partial [Nicotiana sylvestris]
15 Hb_001675_210 0.0608259755 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
16 Hb_001114_220 0.0671284351 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
17 Hb_004592_020 0.0737276343 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
18 Hb_000488_040 0.0754971822 - - unnamed protein product [Vitis vinifera]
19 Hb_001114_290 0.0786186621 - - conserved hypothetical protein [Ricinus communis]
20 Hb_122025_010 0.0796717596 - - hypothetical protein POPTR_0003s052201g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_094462_010 Hb_094462_010 Hb_000563_070 Hb_000563_070 Hb_094462_010--Hb_000563_070 Hb_000022_270 Hb_000022_270 Hb_094462_010--Hb_000022_270 Hb_003685_060 Hb_003685_060 Hb_094462_010--Hb_003685_060 Hb_000264_250 Hb_000264_250 Hb_094462_010--Hb_000264_250 Hb_000419_080 Hb_000419_080 Hb_094462_010--Hb_000419_080 Hb_001604_140 Hb_001604_140 Hb_094462_010--Hb_001604_140 Hb_000563_070--Hb_000264_250 Hb_002551_010 Hb_002551_010 Hb_000563_070--Hb_002551_010 Hb_005747_020 Hb_005747_020 Hb_000563_070--Hb_005747_020 Hb_106528_010 Hb_106528_010 Hb_000563_070--Hb_106528_010 Hb_005747_040 Hb_005747_040 Hb_000563_070--Hb_005747_040 Hb_000022_270--Hb_003685_060 Hb_000022_270--Hb_001604_140 Hb_000201_080 Hb_000201_080 Hb_000022_270--Hb_000201_080 Hb_126040_020 Hb_126040_020 Hb_000022_270--Hb_126040_020 Hb_001675_210 Hb_001675_210 Hb_000022_270--Hb_001675_210 Hb_003685_060--Hb_001604_140 Hb_003685_060--Hb_000201_080 Hb_003685_060--Hb_126040_020 Hb_004981_020 Hb_004981_020 Hb_003685_060--Hb_004981_020 Hb_000264_250--Hb_002551_010 Hb_000264_250--Hb_106528_010 Hb_000264_250--Hb_005747_040 Hb_000264_250--Hb_005747_020 Hb_001032_060 Hb_001032_060 Hb_000419_080--Hb_001032_060 Hb_000419_080--Hb_000563_070 Hb_000419_080--Hb_000264_250 Hb_000419_080--Hb_005747_020 Hb_000419_080--Hb_000022_270 Hb_001604_140--Hb_000201_080 Hb_001604_140--Hb_126040_020 Hb_001604_140--Hb_004981_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0661526 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.77725 0

CAGE analysis