Hb_000419_080

Information

Type -
Description -
Location Contig419: 107471-112049
Sequence    

Annotation

kegg
ID rcu:RCOM_0229170
description protein disulfide isomerase, putative (EC:2.4.1.119)
nr
ID XP_012086283.1
description PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
swissprot
ID Q8VX13
description Protein disulfide isomerase-like 1-3 OS=Arabidopsis thaliana GN=PDIL1-3 PE=2 SV=1
trembl
ID A0A067L9K0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18539 PE=4 SV=1
Gene Ontology
ID GO:0045454
description protein disulfide isomerase-like 1-4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000419_080 0.0 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
2 Hb_094462_010 0.0386968395 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]
3 Hb_001032_060 0.0399994817 - - PREDICTED: ankyrin-2-like [Citrus sinensis]
4 Hb_000563_070 0.044469321 - - PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Sesamum indicum]
5 Hb_000264_250 0.0506124296 - - thioredoxin family protein [Arabidopsis thaliana]
6 Hb_005747_020 0.052854446 - - bacterial-induced peroxidase [Gossypium schwendimanii]
7 Hb_000022_270 0.0541285189 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003685_060 0.0559498385 - - PREDICTED: laccase-15 [Jatropha curcas]
9 Hb_000488_040 0.0562253624 - - unnamed protein product [Vitis vinifera]
10 Hb_001604_140 0.0580352611 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
11 Hb_002551_010 0.0582582231 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_018709_010 0.0615525276 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
13 Hb_000201_080 0.0616171065 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_004592_020 0.0648458134 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
15 Hb_126040_020 0.0655756693 - - -
16 Hb_106528_010 0.0658159621 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
17 Hb_005747_040 0.0670439607 - - PREDICTED: peroxidase N1-like, partial [Nicotiana sylvestris]
18 Hb_028013_010 0.068242047 - - alcohol dehydrogenase, putative [Ricinus communis]
19 Hb_001410_090 0.0715375782 - - transferase, putative [Ricinus communis]
20 Hb_001675_210 0.074495664 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]

Gene co-expression network

sample Hb_000419_080 Hb_000419_080 Hb_094462_010 Hb_094462_010 Hb_000419_080--Hb_094462_010 Hb_001032_060 Hb_001032_060 Hb_000419_080--Hb_001032_060 Hb_000563_070 Hb_000563_070 Hb_000419_080--Hb_000563_070 Hb_000264_250 Hb_000264_250 Hb_000419_080--Hb_000264_250 Hb_005747_020 Hb_005747_020 Hb_000419_080--Hb_005747_020 Hb_000022_270 Hb_000022_270 Hb_000419_080--Hb_000022_270 Hb_094462_010--Hb_000563_070 Hb_094462_010--Hb_000022_270 Hb_003685_060 Hb_003685_060 Hb_094462_010--Hb_003685_060 Hb_094462_010--Hb_000264_250 Hb_001604_140 Hb_001604_140 Hb_094462_010--Hb_001604_140 Hb_001032_060--Hb_005747_020 Hb_001032_060--Hb_094462_010 Hb_018709_010 Hb_018709_010 Hb_001032_060--Hb_018709_010 Hb_001032_060--Hb_000022_270 Hb_000488_040 Hb_000488_040 Hb_001032_060--Hb_000488_040 Hb_000563_070--Hb_000264_250 Hb_002551_010 Hb_002551_010 Hb_000563_070--Hb_002551_010 Hb_000563_070--Hb_005747_020 Hb_106528_010 Hb_106528_010 Hb_000563_070--Hb_106528_010 Hb_005747_040 Hb_005747_040 Hb_000563_070--Hb_005747_040 Hb_000264_250--Hb_002551_010 Hb_000264_250--Hb_106528_010 Hb_000264_250--Hb_005747_040 Hb_000264_250--Hb_005747_020 Hb_005747_020--Hb_002551_010 Hb_005747_020--Hb_106528_010 Hb_005747_020--Hb_094462_010 Hb_005747_020--Hb_005747_040 Hb_000022_270--Hb_003685_060 Hb_000022_270--Hb_001604_140 Hb_000201_080 Hb_000201_080 Hb_000022_270--Hb_000201_080 Hb_126040_020 Hb_126040_020 Hb_000022_270--Hb_126040_020 Hb_001675_210 Hb_001675_210 Hb_000022_270--Hb_001675_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.657743 0 0.023836 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 7.41123 0

CAGE analysis