Hb_001514_080

Information

Type -
Description -
Location Contig1514: 74022-98064
Sequence    

Annotation

kegg
ID tcc:TCM_034779
description S-locus lectin protein kinase family protein, putative
nr
ID KDP41675.1
description hypothetical protein JCGZ_16082 [Jatropha curcas]
swissprot
ID P17801
description Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2
trembl
ID A0A067LB03
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_16082 PE=3 SV=1
Gene Ontology
ID GO:0004674
description receptor protein kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12829: 96449-97281
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001514_080 0.0 - - hypothetical protein JCGZ_16082 [Jatropha curcas]
2 Hb_005144_020 0.1470807191 transcription factor TF Family: MYB hypothetical protein POPTR_0009s01270g [Populus trichocarpa]
3 Hb_000317_210 0.1547977958 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39 [Jatropha curcas]
4 Hb_000025_510 0.1640628048 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
5 Hb_001617_030 0.1706615694 - - conserved hypothetical protein [Ricinus communis]
6 Hb_176979_010 0.1796518316 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
7 Hb_004204_160 0.1799187481 - - S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]
8 Hb_001999_220 0.186233111 - - PREDICTED: cytochrome P450 86A1 [Jatropha curcas]
9 Hb_006196_020 0.1898791929 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100-like [Populus euphratica]
10 Hb_042664_010 0.1923688876 - - hypothetical protein POPTR_0001s07640g, partial [Populus trichocarpa]
11 Hb_039342_030 0.1936076207 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001047_250 0.1955275864 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
13 Hb_146023_010 0.1995330206 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_039655_010 0.2004898206 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]
15 Hb_002615_050 0.2010782623 - - ATP-binding cassette transporter, putative [Ricinus communis]
16 Hb_000141_210 0.2014925674 - - PREDICTED: 36.4 kDa proline-rich protein-like [Camelina sativa]
17 Hb_016172_010 0.2015713476 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
18 Hb_002917_010 0.201634551 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
19 Hb_000160_230 0.2026094941 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
20 Hb_071381_010 0.202946006 - - hypothetical protein JCGZ_21650 [Jatropha curcas]

Gene co-expression network

sample Hb_001514_080 Hb_001514_080 Hb_005144_020 Hb_005144_020 Hb_001514_080--Hb_005144_020 Hb_000317_210 Hb_000317_210 Hb_001514_080--Hb_000317_210 Hb_000025_510 Hb_000025_510 Hb_001514_080--Hb_000025_510 Hb_001617_030 Hb_001617_030 Hb_001514_080--Hb_001617_030 Hb_176979_010 Hb_176979_010 Hb_001514_080--Hb_176979_010 Hb_004204_160 Hb_004204_160 Hb_001514_080--Hb_004204_160 Hb_005144_020--Hb_004204_160 Hb_159769_010 Hb_159769_010 Hb_005144_020--Hb_159769_010 Hb_000739_130 Hb_000739_130 Hb_005144_020--Hb_000739_130 Hb_000281_200 Hb_000281_200 Hb_005144_020--Hb_000281_200 Hb_039655_010 Hb_039655_010 Hb_005144_020--Hb_039655_010 Hb_071381_010 Hb_071381_010 Hb_000317_210--Hb_071381_010 Hb_010839_070 Hb_010839_070 Hb_000317_210--Hb_010839_070 Hb_001571_010 Hb_001571_010 Hb_000317_210--Hb_001571_010 Hb_117464_010 Hb_117464_010 Hb_000317_210--Hb_117464_010 Hb_008160_020 Hb_008160_020 Hb_000317_210--Hb_008160_020 Hb_000640_270 Hb_000640_270 Hb_000317_210--Hb_000640_270 Hb_006478_180 Hb_006478_180 Hb_000025_510--Hb_006478_180 Hb_000025_510--Hb_000317_210 Hb_112082_030 Hb_112082_030 Hb_000025_510--Hb_112082_030 Hb_008705_070 Hb_008705_070 Hb_000025_510--Hb_008705_070 Hb_005511_050 Hb_005511_050 Hb_000025_510--Hb_005511_050 Hb_042664_010 Hb_042664_010 Hb_000025_510--Hb_042664_010 Hb_122025_010 Hb_122025_010 Hb_001617_030--Hb_122025_010 Hb_001617_030--Hb_000317_210 Hb_000537_120 Hb_000537_120 Hb_001617_030--Hb_000537_120 Hb_000563_070 Hb_000563_070 Hb_001617_030--Hb_000563_070 Hb_000264_250 Hb_000264_250 Hb_001617_030--Hb_000264_250 Hb_146023_010 Hb_146023_010 Hb_176979_010--Hb_146023_010 Hb_064885_050 Hb_064885_050 Hb_176979_010--Hb_064885_050 Hb_125644_010 Hb_125644_010 Hb_176979_010--Hb_125644_010 Hb_002917_010 Hb_002917_010 Hb_176979_010--Hb_002917_010 Hb_001442_080 Hb_001442_080 Hb_176979_010--Hb_001442_080 Hb_000939_030 Hb_000939_030 Hb_176979_010--Hb_000939_030 Hb_004204_160--Hb_039655_010 Hb_001134_040 Hb_001134_040 Hb_004204_160--Hb_001134_040 Hb_004097_080 Hb_004097_080 Hb_004204_160--Hb_004097_080 Hb_000712_070 Hb_000712_070 Hb_004204_160--Hb_000712_070 Hb_058620_010 Hb_058620_010 Hb_004204_160--Hb_058620_010 Hb_003090_070 Hb_003090_070 Hb_004204_160--Hb_003090_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0536928 0.0127042 0.00578212 0.0277875 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0145416 0.502899 0

CAGE analysis