Hb_001489_040

Information

Type -
Description -
Location Contig1489: 30967-32649
Sequence    

Annotation

kegg
ID rcu:RCOM_0698250
description hypothetical protein
nr
ID XP_012091952.1
description PREDICTED: galactose oxidase [Jatropha curcas]
swissprot
ID P0CS93
description Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1
trembl
ID A0A067JBU3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21703 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001489_040 0.0 - - PREDICTED: galactose oxidase [Jatropha curcas]
2 Hb_003674_010 0.1644365041 - - purine transporter, putative [Ricinus communis]
3 Hb_000028_360 0.1785617861 - - ubiquitin-protein ligase, putative [Ricinus communis]
4 Hb_000321_010 0.1792364522 - - Chitinase 1 precursor, putative [Ricinus communis]
5 Hb_006916_220 0.1828447642 - - hypothetical protein JCGZ_20099 [Jatropha curcas]
6 Hb_007951_090 0.1844895949 - - hypothetical protein POPTR_0003s06080g [Populus trichocarpa]
7 Hb_002049_030 0.1846307384 - - PREDICTED: uncharacterized protein LOC105635940 isoform X3 [Jatropha curcas]
8 Hb_000661_010 0.1869956005 - - peroxisomal 3-keto-acyl-CoA thiolase [Hevea brasiliensis]
9 Hb_010810_040 0.1871973015 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
10 Hb_000777_020 0.1904171067 - - PREDICTED: 3-ketoacyl-CoA synthase 11 [Jatropha curcas]
11 Hb_005389_090 0.1904884058 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
12 Hb_138705_010 0.1907958833 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
13 Hb_158110_010 0.1912863509 - - hypothetical protein CICLE_v10012017mg [Citrus clementina]
14 Hb_000731_020 0.1918552023 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
15 Hb_000221_280 0.1936301628 - - PREDICTED: protein EXORDIUM-like [Populus euphratica]
16 Hb_000996_100 0.1956428524 - - Nucleotide binding, putative [Theobroma cacao]
17 Hb_132517_010 0.1958126781 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like isoform X3 [Populus euphratica]
18 Hb_011429_010 0.1971574142 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
19 Hb_009620_010 0.1973154778 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
20 Hb_008963_010 0.1976345997 desease resistance Gene Name: LRR_4 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_001489_040 Hb_001489_040 Hb_003674_010 Hb_003674_010 Hb_001489_040--Hb_003674_010 Hb_000028_360 Hb_000028_360 Hb_001489_040--Hb_000028_360 Hb_000321_010 Hb_000321_010 Hb_001489_040--Hb_000321_010 Hb_006916_220 Hb_006916_220 Hb_001489_040--Hb_006916_220 Hb_007951_090 Hb_007951_090 Hb_001489_040--Hb_007951_090 Hb_002049_030 Hb_002049_030 Hb_001489_040--Hb_002049_030 Hb_010012_020 Hb_010012_020 Hb_003674_010--Hb_010012_020 Hb_002422_020 Hb_002422_020 Hb_003674_010--Hb_002422_020 Hb_013591_010 Hb_013591_010 Hb_003674_010--Hb_013591_010 Hb_011429_010 Hb_011429_010 Hb_003674_010--Hb_011429_010 Hb_010573_030 Hb_010573_030 Hb_003674_010--Hb_010573_030 Hb_002420_030 Hb_002420_030 Hb_003674_010--Hb_002420_030 Hb_041534_010 Hb_041534_010 Hb_000028_360--Hb_041534_010 Hb_000028_360--Hb_006916_220 Hb_000028_360--Hb_013591_010 Hb_000028_360--Hb_002422_020 Hb_005605_030 Hb_005605_030 Hb_000028_360--Hb_005605_030 Hb_000731_020 Hb_000731_020 Hb_000028_360--Hb_000731_020 Hb_010810_040 Hb_010810_040 Hb_000321_010--Hb_010810_040 Hb_000321_010--Hb_007951_090 Hb_000321_010--Hb_010012_020 Hb_000321_010--Hb_002420_030 Hb_009620_010 Hb_009620_010 Hb_000321_010--Hb_009620_010 Hb_004724_290 Hb_004724_290 Hb_006916_220--Hb_004724_290 Hb_004724_310 Hb_004724_310 Hb_006916_220--Hb_004724_310 Hb_002006_110 Hb_002006_110 Hb_006916_220--Hb_002006_110 Hb_019978_010 Hb_019978_010 Hb_006916_220--Hb_019978_010 Hb_010136_020 Hb_010136_020 Hb_006916_220--Hb_010136_020 Hb_184752_010 Hb_184752_010 Hb_006916_220--Hb_184752_010 Hb_101370_010 Hb_101370_010 Hb_007951_090--Hb_101370_010 Hb_002783_210 Hb_002783_210 Hb_007951_090--Hb_002783_210 Hb_007951_090--Hb_010810_040 Hb_003529_010 Hb_003529_010 Hb_007951_090--Hb_003529_010 Hb_138705_010 Hb_138705_010 Hb_002049_030--Hb_138705_010 Hb_001019_140 Hb_001019_140 Hb_002049_030--Hb_001019_140 Hb_000509_040 Hb_000509_040 Hb_002049_030--Hb_000509_040 Hb_000991_110 Hb_000991_110 Hb_002049_030--Hb_000991_110 Hb_048937_010 Hb_048937_010 Hb_002049_030--Hb_048937_010 Hb_145268_010 Hb_145268_010 Hb_002049_030--Hb_145268_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.438138 0.144554 0.309405 0.0466407 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0257609 0

CAGE analysis