Hb_003674_010

Information

Type -
Description -
Location Contig3674: 17255-18493
Sequence    

Annotation

kegg
ID rcu:RCOM_0274170
description purine transporter, putative
nr
ID XP_002533991.1
description purine transporter, putative [Ricinus communis]
swissprot
ID Q9SY29
description Probable purine permease 4 OS=Arabidopsis thaliana GN=PUP4 PE=2 SV=1
trembl
ID B9T6X2
description Purine transporter, putative OS=Ricinus communis GN=RCOM_0274170 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable purine permease 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003674_010 0.0 - - purine transporter, putative [Ricinus communis]
2 Hb_010012_020 0.0858380606 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002422_020 0.0911808596 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
4 Hb_013591_010 0.0947199229 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]
5 Hb_011429_010 0.0967059463 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
6 Hb_010573_030 0.1013865324 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002420_030 0.1107928957 - - Disease resistance protein RPS5, putative [Ricinus communis]
8 Hb_004724_290 0.1109768689 transcription factor TF Family: NAC -
9 Hb_137612_010 0.1118242944 - - cytochrome P450, putative [Ricinus communis]
10 Hb_000769_030 0.1150420618 - - ankyrin repeat-containing protein, putative [Ricinus communis]
11 Hb_003602_080 0.1163949232 - - hypothetical protein POPTR_0002s10890g [Populus trichocarpa]
12 Hb_098175_010 0.1168134939 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
13 Hb_007728_010 0.118407331 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
14 Hb_019978_010 0.1220100804 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
15 Hb_165552_020 0.1281940164 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
16 Hb_000731_020 0.1294627022 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
17 Hb_000028_360 0.1360075665 - - ubiquitin-protein ligase, putative [Ricinus communis]
18 Hb_041534_010 0.1376173754 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
19 Hb_003071_040 0.1389321935 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
20 Hb_009697_010 0.1403564728 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003674_010 Hb_003674_010 Hb_010012_020 Hb_010012_020 Hb_003674_010--Hb_010012_020 Hb_002422_020 Hb_002422_020 Hb_003674_010--Hb_002422_020 Hb_013591_010 Hb_013591_010 Hb_003674_010--Hb_013591_010 Hb_011429_010 Hb_011429_010 Hb_003674_010--Hb_011429_010 Hb_010573_030 Hb_010573_030 Hb_003674_010--Hb_010573_030 Hb_002420_030 Hb_002420_030 Hb_003674_010--Hb_002420_030 Hb_003602_080 Hb_003602_080 Hb_010012_020--Hb_003602_080 Hb_010012_020--Hb_002420_030 Hb_010012_020--Hb_010573_030 Hb_165552_020 Hb_165552_020 Hb_010012_020--Hb_165552_020 Hb_010012_020--Hb_011429_010 Hb_002422_020--Hb_013591_010 Hb_137612_010 Hb_137612_010 Hb_002422_020--Hb_137612_010 Hb_002422_020--Hb_010573_030 Hb_007728_010 Hb_007728_010 Hb_002422_020--Hb_007728_010 Hb_041534_010 Hb_041534_010 Hb_002422_020--Hb_041534_010 Hb_064692_010 Hb_064692_010 Hb_002422_020--Hb_064692_010 Hb_013591_010--Hb_137612_010 Hb_013591_010--Hb_064692_010 Hb_013591_010--Hb_041534_010 Hb_013591_010--Hb_010573_030 Hb_013591_010--Hb_007728_010 Hb_000769_030 Hb_000769_030 Hb_011429_010--Hb_000769_030 Hb_004724_290 Hb_004724_290 Hb_011429_010--Hb_004724_290 Hb_098175_010 Hb_098175_010 Hb_011429_010--Hb_098175_010 Hb_128460_020 Hb_128460_020 Hb_011429_010--Hb_128460_020 Hb_010369_010 Hb_010369_010 Hb_011429_010--Hb_010369_010 Hb_011429_010--Hb_003602_080 Hb_010573_030--Hb_007728_010 Hb_010573_030--Hb_137612_010 Hb_000134_010 Hb_000134_010 Hb_010573_030--Hb_000134_010 Hb_094839_010 Hb_094839_010 Hb_010573_030--Hb_094839_010 Hb_002420_030--Hb_165552_020 Hb_005040_010 Hb_005040_010 Hb_002420_030--Hb_005040_010 Hb_001957_050 Hb_001957_050 Hb_002420_030--Hb_001957_050 Hb_039410_010 Hb_039410_010 Hb_002420_030--Hb_039410_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.804806 0.170192 0.456247 0.0171473 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis