Hb_001476_030

Information

Type -
Description -
Location Contig1476: 15245-16397
Sequence    

Annotation

kegg
ID rcu:RCOM_1622030
description Cationic peroxidase 2 precursor, putative (EC:1.11.1.7)
nr
ID XP_002512127.1
description Cationic peroxidase 2 precursor, putative [Ricinus communis]
swissprot
ID P22196
description Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1
trembl
ID B9RCX9
description Peroxidase OS=Ricinus communis GN=RCOM_1622030 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase n1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12026: 15474-16142
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001476_030 0.0 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
2 Hb_004316_080 0.1107125166 - - PREDICTED: uncharacterized protein LOC104602212 [Nelumbo nucifera]
3 Hb_007951_020 0.125259914 - - cationic amino acid transporter 5 family protein [Populus trichocarpa]
4 Hb_006316_090 0.1275864813 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
5 Hb_000358_010 0.1426196149 - - PREDICTED: basic blue protein [Populus euphratica]
6 Hb_000103_460 0.1469107307 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
7 Hb_001769_150 0.1525926924 - - PREDICTED: uncharacterized protein LOC105633924 [Jatropha curcas]
8 Hb_008132_010 0.1688467338 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
9 Hb_000471_030 0.1699673942 - - -
10 Hb_005743_010 0.1705210409 - - RING/U-box superfamily protein, putative [Theobroma cacao]
11 Hb_002805_260 0.1706266006 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004316_160 0.1710899304 - - hypothetical protein CISIN_1g047906mg, partial [Citrus sinensis]
13 Hb_000205_180 0.1735708028 - - lipoxygenase, putative [Ricinus communis]
14 Hb_000321_040 0.174440321 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
15 Hb_000552_030 0.1771716086 - - glucose-6-phosphate 1-dehydrogenase, putative [Ricinus communis]
16 Hb_007044_260 0.1779959276 - - PREDICTED: uncharacterized protein LOC105638706 isoform X1 [Jatropha curcas]
17 Hb_001159_220 0.1795386965 - - ESC, putative [Ricinus communis]
18 Hb_007163_030 0.1801449538 - - hypothetical protein RCOM_0187400 [Ricinus communis]
19 Hb_001369_550 0.1801641871 - - 21 kDa protein precursor, putative [Ricinus communis]
20 Hb_001890_040 0.1803041785 - - receptor-kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001476_030 Hb_001476_030 Hb_004316_080 Hb_004316_080 Hb_001476_030--Hb_004316_080 Hb_007951_020 Hb_007951_020 Hb_001476_030--Hb_007951_020 Hb_006316_090 Hb_006316_090 Hb_001476_030--Hb_006316_090 Hb_000358_010 Hb_000358_010 Hb_001476_030--Hb_000358_010 Hb_000103_460 Hb_000103_460 Hb_001476_030--Hb_000103_460 Hb_001769_150 Hb_001769_150 Hb_001476_030--Hb_001769_150 Hb_004316_080--Hb_006316_090 Hb_004607_020 Hb_004607_020 Hb_004316_080--Hb_004607_020 Hb_001649_050 Hb_001649_050 Hb_004316_080--Hb_001649_050 Hb_004316_080--Hb_007951_020 Hb_005743_010 Hb_005743_010 Hb_004316_080--Hb_005743_010 Hb_000035_150 Hb_000035_150 Hb_007951_020--Hb_000035_150 Hb_007643_060 Hb_007643_060 Hb_007951_020--Hb_007643_060 Hb_003626_020 Hb_003626_020 Hb_007951_020--Hb_003626_020 Hb_012691_010 Hb_012691_010 Hb_007951_020--Hb_012691_010 Hb_007951_020--Hb_005743_010 Hb_000343_010 Hb_000343_010 Hb_007951_020--Hb_000343_010 Hb_006316_090--Hb_000358_010 Hb_006316_090--Hb_000103_460 Hb_001076_010 Hb_001076_010 Hb_006316_090--Hb_001076_010 Hb_001369_550 Hb_001369_550 Hb_006316_090--Hb_001369_550 Hb_001366_380 Hb_001366_380 Hb_006316_090--Hb_001366_380 Hb_007044_260 Hb_007044_260 Hb_000358_010--Hb_007044_260 Hb_000358_010--Hb_001076_010 Hb_002874_010 Hb_002874_010 Hb_000358_010--Hb_002874_010 Hb_000358_010--Hb_001769_150 Hb_000358_010--Hb_000103_460 Hb_000103_460--Hb_001076_010 Hb_000103_460--Hb_001369_550 Hb_000103_460--Hb_002874_010 Hb_005306_030 Hb_005306_030 Hb_000103_460--Hb_005306_030 Hb_036182_010 Hb_036182_010 Hb_001769_150--Hb_036182_010 Hb_001769_150--Hb_006316_090 Hb_001769_150--Hb_007044_260 Hb_001769_150--Hb_001076_010 Hb_006120_140 Hb_006120_140 Hb_001769_150--Hb_006120_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.289257 7.79355 0.955041 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.0771 0.424615

CAGE analysis