Hb_001221_470

Information

Type -
Description -
Location Contig1221: 312465-313244
Sequence    

Annotation

kegg
ID rcu:RCOM_1505550
description hypothetical protein
nr
ID XP_012090663.1
description PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JST9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26425 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_470 0.0 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
2 Hb_026198_020 0.1240560742 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
3 Hb_000245_100 0.1312946162 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
4 Hb_005329_030 0.1338079537 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
5 Hb_006916_140 0.1401975689 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
6 Hb_000392_490 0.1457699948 - - PREDICTED: uncharacterized protein LOC105640495 isoform X1 [Jatropha curcas]
7 Hb_006355_070 0.1499315613 transcription factor TF Family: bHLH Phytochrome-interacting factor, putative [Ricinus communis]
8 Hb_011161_090 0.1549063784 - - -
9 Hb_090390_010 0.1600318131 - - hypothetical protein POPTR_0006s28850g [Populus trichocarpa]
10 Hb_002374_520 0.1620831255 - - early nodulin 8 precursor family protein [Populus trichocarpa]
11 Hb_094437_030 0.1640146269 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
12 Hb_005391_050 0.1641100731 - - PREDICTED: uncharacterized protein LOC105643654 [Jatropha curcas]
13 Hb_009641_040 0.1656051988 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
14 Hb_000023_180 0.1683594908 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
15 Hb_005545_110 0.1685543166 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
16 Hb_037684_010 0.1689357329 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
17 Hb_002890_110 0.1691251441 - - PREDICTED: protein NRT1/ PTR FAMILY 4.3 [Jatropha curcas]
18 Hb_002750_040 0.1713043346 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
19 Hb_014361_040 0.1716957089 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
20 Hb_004307_070 0.1717571568 - - kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001221_470 Hb_001221_470 Hb_026198_020 Hb_026198_020 Hb_001221_470--Hb_026198_020 Hb_000245_100 Hb_000245_100 Hb_001221_470--Hb_000245_100 Hb_005329_030 Hb_005329_030 Hb_001221_470--Hb_005329_030 Hb_006916_140 Hb_006916_140 Hb_001221_470--Hb_006916_140 Hb_000392_490 Hb_000392_490 Hb_001221_470--Hb_000392_490 Hb_006355_070 Hb_006355_070 Hb_001221_470--Hb_006355_070 Hb_002750_040 Hb_002750_040 Hb_026198_020--Hb_002750_040 Hb_113766_010 Hb_113766_010 Hb_026198_020--Hb_113766_010 Hb_002391_240 Hb_002391_240 Hb_026198_020--Hb_002391_240 Hb_090390_010 Hb_090390_010 Hb_026198_020--Hb_090390_010 Hb_026198_020--Hb_000392_490 Hb_006992_010 Hb_006992_010 Hb_026198_020--Hb_006992_010 Hb_000245_100--Hb_005329_030 Hb_037684_010 Hb_037684_010 Hb_000245_100--Hb_037684_010 Hb_003858_060 Hb_003858_060 Hb_000245_100--Hb_003858_060 Hb_000245_100--Hb_006355_070 Hb_004204_220 Hb_004204_220 Hb_000245_100--Hb_004204_220 Hb_009222_080 Hb_009222_080 Hb_000245_100--Hb_009222_080 Hb_000023_180 Hb_000023_180 Hb_005329_030--Hb_000023_180 Hb_005329_030--Hb_006916_140 Hb_004374_030 Hb_004374_030 Hb_005329_030--Hb_004374_030 Hb_000963_120 Hb_000963_120 Hb_005329_030--Hb_000963_120 Hb_005329_030--Hb_004204_220 Hb_000000_290 Hb_000000_290 Hb_005329_030--Hb_000000_290 Hb_006916_140--Hb_000963_120 Hb_006916_140--Hb_009222_080 Hb_006916_140--Hb_000392_490 Hb_006916_140--Hb_000023_180 Hb_094437_020 Hb_094437_020 Hb_006916_140--Hb_094437_020 Hb_000309_070 Hb_000309_070 Hb_000392_490--Hb_000309_070 Hb_001629_050 Hb_001629_050 Hb_000392_490--Hb_001629_050 Hb_000392_490--Hb_005329_030 Hb_000392_490--Hb_000963_120 Hb_038833_010 Hb_038833_010 Hb_006355_070--Hb_038833_010 Hb_004307_070 Hb_004307_070 Hb_006355_070--Hb_004307_070 Hb_006355_070--Hb_003858_060 Hb_002876_280 Hb_002876_280 Hb_006355_070--Hb_002876_280 Hb_006355_070--Hb_001629_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.229529 0.0699099 0.779927 0 0.037213
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.289048 0.549435

CAGE analysis