Hb_001178_070

Information

Type -
Description -
Location Contig1178: 107412-122687
Sequence    

Annotation

kegg
ID vvi:100251206
description BTB/POZ domain-containing protein FBL11
nr
ID XP_012066456.1
description PREDICTED: BTB/POZ domain-containing protein FBL11 [Jatropha curcas]
swissprot
ID Q8S8F2
description BTB/POZ domain-containing protein FBL11 OS=Arabidopsis thaliana GN=FBL11 PE=2 SV=2
trembl
ID A0A0D2TSL1
description Gossypium raimondii chromosome 7, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_007G371000 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05365: 107329-116740 , PASA_asmbl_05366: 107239-112227 , PASA_asmbl_05368: 118171-119775 , PASA_asmbl_05369: 122255-122454
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001178_070 0.0 - - PREDICTED: BTB/POZ domain-containing protein FBL11 [Jatropha curcas]
2 Hb_009486_180 0.0604636259 - - unknown [Glycine max]
3 Hb_000205_100 0.0734937658 - - PREDICTED: exportin-4 [Jatropha curcas]
4 Hb_000011_230 0.0761750464 - - PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Jatropha curcas]
5 Hb_000613_050 0.0765612874 - - PREDICTED: uncharacterized protein LOC105641544 isoform X2 [Jatropha curcas]
6 Hb_004954_070 0.0777828405 - - PREDICTED: uncharacterized protein LOC105645187 [Jatropha curcas]
7 Hb_000181_400 0.0779895564 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 25 isoform X2 [Jatropha curcas]
8 Hb_000116_410 0.0785805555 - - hypothetical protein JCGZ_22416 [Jatropha curcas]
9 Hb_000023_330 0.0794422137 - - RNA recognition motif-containing family protein [Populus trichocarpa]
10 Hb_000200_120 0.0818171315 - - PREDICTED: probable fructose-bisphosphate aldolase 3, chloroplastic [Jatropha curcas]
11 Hb_000907_110 0.0822538945 - - dihydroxyacetone kinase family protein [Populus trichocarpa]
12 Hb_000369_130 0.0823986901 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Jatropha curcas]
13 Hb_001635_090 0.0835884816 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
14 Hb_002477_090 0.0836833839 - - PREDICTED: uncharacterized protein LOC105631409 isoform X1 [Jatropha curcas]
15 Hb_017862_020 0.0839162076 - - PREDICTED: probable inactive serine/threonine-protein kinase lvsG [Jatropha curcas]
16 Hb_006198_120 0.0848333152 - - PREDICTED: guanine nucleotide-binding protein-like NSN1 [Jatropha curcas]
17 Hb_002217_030 0.0863444673 - - PREDICTED: DNA (cytosine-5)-methyltransferase DRM2 isoform X1 [Jatropha curcas]
18 Hb_164544_010 0.0876605534 - - PREDICTED: protein arginine N-methyltransferase 1.5 isoform X2 [Jatropha curcas]
19 Hb_000225_040 0.0877785377 - - PREDICTED: translation factor GUF1 homolog, mitochondrial [Nelumbo nucifera]
20 Hb_001761_130 0.088267203 - - PREDICTED: uncharacterized protein LOC105646118 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001178_070 Hb_001178_070 Hb_009486_180 Hb_009486_180 Hb_001178_070--Hb_009486_180 Hb_000205_100 Hb_000205_100 Hb_001178_070--Hb_000205_100 Hb_000011_230 Hb_000011_230 Hb_001178_070--Hb_000011_230 Hb_000613_050 Hb_000613_050 Hb_001178_070--Hb_000613_050 Hb_004954_070 Hb_004954_070 Hb_001178_070--Hb_004954_070 Hb_000181_400 Hb_000181_400 Hb_001178_070--Hb_000181_400 Hb_009175_020 Hb_009175_020 Hb_009486_180--Hb_009175_020 Hb_000900_030 Hb_000900_030 Hb_009486_180--Hb_000900_030 Hb_009486_180--Hb_000011_230 Hb_002311_290 Hb_002311_290 Hb_009486_180--Hb_002311_290 Hb_001062_010 Hb_001062_010 Hb_009486_180--Hb_001062_010 Hb_000193_190 Hb_000193_190 Hb_000205_100--Hb_000193_190 Hb_001946_010 Hb_001946_010 Hb_000205_100--Hb_001946_010 Hb_000225_040 Hb_000225_040 Hb_000205_100--Hb_000225_040 Hb_000205_100--Hb_000613_050 Hb_004689_050 Hb_004689_050 Hb_000205_100--Hb_004689_050 Hb_000190_120 Hb_000190_120 Hb_000011_230--Hb_000190_120 Hb_000011_230--Hb_004954_070 Hb_000011_230--Hb_009175_020 Hb_004412_010 Hb_004412_010 Hb_000011_230--Hb_004412_010 Hb_000084_120 Hb_000084_120 Hb_000011_230--Hb_000084_120 Hb_001343_040 Hb_001343_040 Hb_000613_050--Hb_001343_040 Hb_000592_030 Hb_000592_030 Hb_000613_050--Hb_000592_030 Hb_000008_290 Hb_000008_290 Hb_000613_050--Hb_000008_290 Hb_002213_070 Hb_002213_070 Hb_000613_050--Hb_002213_070 Hb_001199_100 Hb_001199_100 Hb_000613_050--Hb_001199_100 Hb_002815_030 Hb_002815_030 Hb_000613_050--Hb_002815_030 Hb_007575_050 Hb_007575_050 Hb_004954_070--Hb_007575_050 Hb_017862_020 Hb_017862_020 Hb_004954_070--Hb_017862_020 Hb_004410_030 Hb_004410_030 Hb_004954_070--Hb_004410_030 Hb_004954_070--Hb_000225_040 Hb_031284_040 Hb_031284_040 Hb_004954_070--Hb_031284_040 Hb_004324_130 Hb_004324_130 Hb_000181_400--Hb_004324_130 Hb_000907_110 Hb_000907_110 Hb_000181_400--Hb_000907_110 Hb_003294_070 Hb_003294_070 Hb_000181_400--Hb_003294_070 Hb_007416_120 Hb_007416_120 Hb_000181_400--Hb_007416_120 Hb_000111_290 Hb_000111_290 Hb_000181_400--Hb_000111_290 Hb_001876_050 Hb_001876_050 Hb_000181_400--Hb_001876_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.87978 5.59464 2.41537 4.65646 6.24697 6.53471
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.92888 5.12244 3.27023 8.47436 3.6479

CAGE analysis