Hb_000925_140

Information

Type transcription factor
Description TF Family: HB
Location Contig925: 118765-122705
Sequence    

Annotation

kegg
ID rcu:RCOM_0418780
description bel1 homeotic protein, putative
nr
ID XP_002524053.1
description bel1 homeotic protein, putative [Ricinus communis]
swissprot
ID Q9SJ56
description BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1
trembl
ID B9SDI4
description Bel1 homeotic protein, putative OS=Ricinus communis GN=RCOM_0418780 PE=4 SV=1
Gene Ontology
ID GO:0005634
description bel1-like homeodomain protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62598: 118855-122940 , PASA_asmbl_62599: 118855-123168 , PASA_asmbl_62600: 118855-122356
cDNA
(Sanger)
(ID:Location)		 040_H06.ab1: 121351-122846

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000925_140 0.0 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
2 Hb_000213_120 0.0722730227 - - ABC transporter family protein [Hevea brasiliensis]
3 Hb_032808_030 0.0788992382 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
4 Hb_000236_410 0.1001030479 - - Paramyosin, putative [Ricinus communis]
5 Hb_000105_040 0.1045566656 - - PREDICTED: serine/threonine-protein kinase TOR isoform X2 [Jatropha curcas]
6 Hb_013399_070 0.1055625611 - - PREDICTED: uncharacterized protein LOC105631409 isoform X1 [Jatropha curcas]
7 Hb_001935_140 0.1087165958 - - CCR4-NOT transcription complex subunit 1 [Gossypium arboreum]
8 Hb_001266_100 0.1111547223 - - PREDICTED: uncharacterized protein LOC105649131 [Jatropha curcas]
9 Hb_011242_060 0.1125714495 transcription factor TF Family: SNF2 Chromo domain protein, putative [Ricinus communis]
10 Hb_009476_040 0.112693905 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001105_160 0.1132591036 - - PREDICTED: protein phosphatase 2C 32 [Jatropha curcas]
12 Hb_000069_470 0.1133350102 - - PREDICTED: uncharacterized protein LOC105642863 isoform X1 [Jatropha curcas]
13 Hb_002662_020 0.1139730695 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
14 Hb_000069_410 0.1141131134 - - PREDICTED: protein SDE2 homolog [Jatropha curcas]
15 Hb_000270_030 0.1160867623 transcription factor TF Family: HB hypothetical protein POPTR_0015s07640g [Populus trichocarpa]
16 Hb_001821_090 0.1168500783 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 2 [Jatropha curcas]
17 Hb_000487_380 0.1173944697 - - PREDICTED: protein PAT1 homolog 1 isoform X1 [Jatropha curcas]
18 Hb_000631_120 0.118953469 - - hypothetical protein CISIN_1g0431902mg, partial [Citrus sinensis]
19 Hb_000025_280 0.1194309613 transcription factor TF Family: C3H hypothetical protein JCGZ_07432 [Jatropha curcas]
20 Hb_074969_010 0.1198114094 - - hypothetical protein JCGZ_23339 [Jatropha curcas]

Gene co-expression network

sample Hb_000925_140 Hb_000925_140 Hb_000213_120 Hb_000213_120 Hb_000925_140--Hb_000213_120 Hb_032808_030 Hb_032808_030 Hb_000925_140--Hb_032808_030 Hb_000236_410 Hb_000236_410 Hb_000925_140--Hb_000236_410 Hb_000105_040 Hb_000105_040 Hb_000925_140--Hb_000105_040 Hb_013399_070 Hb_013399_070 Hb_000925_140--Hb_013399_070 Hb_001935_140 Hb_001935_140 Hb_000925_140--Hb_001935_140 Hb_000213_120--Hb_032808_030 Hb_000369_130 Hb_000369_130 Hb_000213_120--Hb_000369_130 Hb_001123_050 Hb_001123_050 Hb_000213_120--Hb_001123_050 Hb_000862_040 Hb_000862_040 Hb_000213_120--Hb_000862_040 Hb_002662_020 Hb_002662_020 Hb_000213_120--Hb_002662_020 Hb_032808_030--Hb_000236_410 Hb_032808_030--Hb_002662_020 Hb_032808_030--Hb_000105_040 Hb_001105_160 Hb_001105_160 Hb_032808_030--Hb_001105_160 Hb_144744_010 Hb_144744_010 Hb_000236_410--Hb_144744_010 Hb_093084_070 Hb_093084_070 Hb_000236_410--Hb_093084_070 Hb_010712_090 Hb_010712_090 Hb_000236_410--Hb_010712_090 Hb_001055_030 Hb_001055_030 Hb_000236_410--Hb_001055_030 Hb_000236_410--Hb_001935_140 Hb_000105_040--Hb_001935_140 Hb_001699_280 Hb_001699_280 Hb_000105_040--Hb_001699_280 Hb_003581_170 Hb_003581_170 Hb_000105_040--Hb_003581_170 Hb_005542_140 Hb_005542_140 Hb_000105_040--Hb_005542_140 Hb_000069_410 Hb_000069_410 Hb_000105_040--Hb_000069_410 Hb_001951_170 Hb_001951_170 Hb_000105_040--Hb_001951_170 Hb_000170_150 Hb_000170_150 Hb_013399_070--Hb_000170_150 Hb_003768_050 Hb_003768_050 Hb_013399_070--Hb_003768_050 Hb_001946_340 Hb_001946_340 Hb_013399_070--Hb_001946_340 Hb_000069_470 Hb_000069_470 Hb_013399_070--Hb_000069_470 Hb_001821_090 Hb_001821_090 Hb_013399_070--Hb_001821_090 Hb_000579_230 Hb_000579_230 Hb_013399_070--Hb_000579_230 Hb_001541_250 Hb_001541_250 Hb_001935_140--Hb_001541_250 Hb_007054_040 Hb_007054_040 Hb_001935_140--Hb_007054_040 Hb_001935_140--Hb_000862_040 Hb_001935_140--Hb_003581_170 Hb_001935_140--Hb_005542_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
154.397 268.414 40.3109 158.544 112.405 163.169
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
73.8013 127.196 76.5934 184.811 128.511

CAGE analysis