Hb_000709_060

Information

Type -
Description -
Location Contig709: 141027-148923
Sequence    

Annotation

kegg
ID pxb:103937985
description abscisic-aldehyde oxidase
nr
ID XP_011005961.1
description PREDICTED: abscisic-aldehyde oxidase-like isoform X5 [Populus euphratica]
swissprot
ID -
description -
trembl
ID H6UM87
description Aldehyde oxidase (Fragment) OS=Carica papaya PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55174: 147685-148438
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000709_060 0.0 - - PREDICTED: abscisic-aldehyde oxidase-like isoform X5 [Populus euphratica]
2 Hb_001587_190 0.1250816126 - - PREDICTED: uncharacterized protein LOC105762101 [Gossypium raimondii]
3 Hb_004108_080 0.1756899874 - - PREDICTED: endo-1,3;1,4-beta-D-glucanase [Vitis vinifera]
4 Hb_003893_090 0.1987073622 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
5 Hb_102465_010 0.2002307986 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
6 Hb_089685_010 0.2015945186 - - -
7 Hb_000442_100 0.2027317168 - - PREDICTED: staphylococcal-like nuclease CAN2 [Jatropha curcas]
8 Hb_005056_060 0.2034285639 - - PREDICTED: prostamide/prostaglandin F synthase isoform X1 [Jatropha curcas]
9 Hb_001248_050 0.2041435171 - - PREDICTED: PXMP2/4 family protein 4-like [Jatropha curcas]
10 Hb_000877_060 0.2052453516 - - hypothetical protein POPTR_0002s22050g [Populus trichocarpa]
11 Hb_004657_020 0.2054068278 - - rer1 protein, putative [Ricinus communis]
12 Hb_005329_020 0.2064422951 - - PREDICTED: U-box domain-containing protein 8 [Jatropha curcas]
13 Hb_022461_010 0.2069021908 - - -
14 Hb_012779_100 0.2069942808 - - conserved hypothetical protein [Ricinus communis]
15 Hb_012052_060 0.2073262814 - - hypothetical protein POPTR_0018s10190g [Populus trichocarpa]
16 Hb_009158_030 0.2084865174 transcription factor TF Family: HB homeobox leucine zipper family protein [Populus trichocarpa]
17 Hb_000521_150 0.2091235137 - - PREDICTED: uncharacterized protein LOC105650332 [Jatropha curcas]
18 Hb_000157_120 0.2099974836 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
19 Hb_003747_040 0.2122727611 - - -
20 Hb_001902_080 0.213160102 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000709_060 Hb_000709_060 Hb_001587_190 Hb_001587_190 Hb_000709_060--Hb_001587_190 Hb_004108_080 Hb_004108_080 Hb_000709_060--Hb_004108_080 Hb_003893_090 Hb_003893_090 Hb_000709_060--Hb_003893_090 Hb_102465_010 Hb_102465_010 Hb_000709_060--Hb_102465_010 Hb_089685_010 Hb_089685_010 Hb_000709_060--Hb_089685_010 Hb_000442_100 Hb_000442_100 Hb_000709_060--Hb_000442_100 Hb_001587_190--Hb_004108_080 Hb_005329_020 Hb_005329_020 Hb_001587_190--Hb_005329_020 Hb_001248_050 Hb_001248_050 Hb_001587_190--Hb_001248_050 Hb_000329_650 Hb_000329_650 Hb_001587_190--Hb_000329_650 Hb_009158_030 Hb_009158_030 Hb_001587_190--Hb_009158_030 Hb_005056_060 Hb_005056_060 Hb_004108_080--Hb_005056_060 Hb_000567_030 Hb_000567_030 Hb_004108_080--Hb_000567_030 Hb_008554_020 Hb_008554_020 Hb_004108_080--Hb_008554_020 Hb_004310_030 Hb_004310_030 Hb_004108_080--Hb_004310_030 Hb_000446_030 Hb_000446_030 Hb_004108_080--Hb_000446_030 Hb_004108_080--Hb_005329_020 Hb_014720_080 Hb_014720_080 Hb_003893_090--Hb_014720_080 Hb_002909_070 Hb_002909_070 Hb_003893_090--Hb_002909_070 Hb_002540_030 Hb_002540_030 Hb_003893_090--Hb_002540_030 Hb_003125_150 Hb_003125_150 Hb_003893_090--Hb_003125_150 Hb_000815_260 Hb_000815_260 Hb_003893_090--Hb_000815_260 Hb_002182_060 Hb_002182_060 Hb_003893_090--Hb_002182_060 Hb_102465_010--Hb_001587_190 Hb_000699_020 Hb_000699_020 Hb_102465_010--Hb_000699_020 Hb_101334_010 Hb_101334_010 Hb_102465_010--Hb_101334_010 Hb_000788_120 Hb_000788_120 Hb_102465_010--Hb_000788_120 Hb_000510_100 Hb_000510_100 Hb_102465_010--Hb_000510_100 Hb_001373_150 Hb_001373_150 Hb_089685_010--Hb_001373_150 Hb_000576_010 Hb_000576_010 Hb_089685_010--Hb_000576_010 Hb_000220_050 Hb_000220_050 Hb_089685_010--Hb_000220_050 Hb_012779_100 Hb_012779_100 Hb_089685_010--Hb_012779_100 Hb_000816_130 Hb_000816_130 Hb_089685_010--Hb_000816_130 Hb_004724_100 Hb_004724_100 Hb_000442_100--Hb_004724_100 Hb_003086_110 Hb_003086_110 Hb_000442_100--Hb_003086_110 Hb_001818_080 Hb_001818_080 Hb_000442_100--Hb_001818_080 Hb_034585_030 Hb_034585_030 Hb_000442_100--Hb_034585_030 Hb_015026_120 Hb_015026_120 Hb_000442_100--Hb_015026_120 Hb_000617_320 Hb_000617_320 Hb_000442_100--Hb_000617_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.20942 2.74037 1.45142 2.00284 0.110555 8.12472
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.2805 7.68805 3.90055 4.43079 0.672163

CAGE analysis