Hb_000614_270

Information

Type -
Description -
Location Contig614: 176672-187671
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000614_270 0.0 - - -
2 Hb_000060_060 0.1854893622 transcription factor TF Family: C2H2 hypothetical protein JCGZ_22940 [Jatropha curcas]
3 Hb_003746_020 0.1906138947 - - PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic [Gossypium raimondii]
4 Hb_104735_010 0.1921048098 - - cytochrome c biogenesis C (mitochondrion) [Hevea brasiliensis]
5 Hb_002482_050 0.1949559139 transcription factor TF Family: NAC F-box family protein [Populus trichocarpa]
6 Hb_143004_010 0.2067813307 - - PREDICTED: uncharacterized J domain-containing protein C1071.09c [Eucalyptus grandis]
7 Hb_062192_060 0.2097573598 - - maturase (mitochondrion) [Hevea brasiliensis]
8 Hb_154997_010 0.2175040241 - - hypothetical protein POPTR_0001s43680g, partial [Populus trichocarpa]
9 Hb_001450_010 0.224137255 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
10 Hb_000710_160 0.2250068617 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
11 Hb_002495_050 0.2261122485 - - PREDICTED: uncharacterized protein LOC105639161 [Jatropha curcas]
12 Hb_001124_170 0.2270859827 - - putative retrotransposon protein [Phyllostachys edulis]
13 Hb_000307_230 0.2272149707 - - -
14 Hb_021374_020 0.227839305 - - PREDICTED: uncharacterized protein LOC101298847, partial [Fragaria vesca subsp. vesca]
15 Hb_088080_030 0.2348295651 - - ribosomal protein S4 [Hevea brasiliensis]
16 Hb_028527_010 0.2370959755 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
17 Hb_159938_010 0.2421764635 - - phosphoprotein phosphatase, putative [Ricinus communis]
18 Hb_003772_010 0.2442936956 - - polyprotein [Oryza australiensis]
19 Hb_171685_040 0.2489120703 - - ribosomal protein S13 (mitochondrion) [Hevea brasiliensis]
20 Hb_171685_030 0.2513537673 - - URF-1 [Citrullus lanatus]

Gene co-expression network

sample Hb_000614_270 Hb_000614_270 Hb_000060_060 Hb_000060_060 Hb_000614_270--Hb_000060_060 Hb_003746_020 Hb_003746_020 Hb_000614_270--Hb_003746_020 Hb_104735_010 Hb_104735_010 Hb_000614_270--Hb_104735_010 Hb_002482_050 Hb_002482_050 Hb_000614_270--Hb_002482_050 Hb_143004_010 Hb_143004_010 Hb_000614_270--Hb_143004_010 Hb_062192_060 Hb_062192_060 Hb_000614_270--Hb_062192_060 Hb_002599_040 Hb_002599_040 Hb_000060_060--Hb_002599_040 Hb_000060_060--Hb_104735_010 Hb_000060_060--Hb_143004_010 Hb_003739_040 Hb_003739_040 Hb_000060_060--Hb_003739_040 Hb_006474_010 Hb_006474_010 Hb_000060_060--Hb_006474_010 Hb_088080_030 Hb_088080_030 Hb_003746_020--Hb_088080_030 Hb_000920_020 Hb_000920_020 Hb_003746_020--Hb_000920_020 Hb_000710_160 Hb_000710_160 Hb_003746_020--Hb_000710_160 Hb_189099_020 Hb_189099_020 Hb_003746_020--Hb_189099_020 Hb_003746_020--Hb_062192_060 Hb_154430_010 Hb_154430_010 Hb_003746_020--Hb_154430_010 Hb_041813_030 Hb_041813_030 Hb_104735_010--Hb_041813_030 Hb_021374_020 Hb_021374_020 Hb_104735_010--Hb_021374_020 Hb_159305_020 Hb_159305_020 Hb_104735_010--Hb_159305_020 Hb_012163_050 Hb_012163_050 Hb_104735_010--Hb_012163_050 Hb_097433_030 Hb_097433_030 Hb_104735_010--Hb_097433_030 Hb_042463_070 Hb_042463_070 Hb_104735_010--Hb_042463_070 Hb_002482_050--Hb_062192_060 Hb_034197_020 Hb_034197_020 Hb_002482_050--Hb_034197_020 Hb_013420_090 Hb_013420_090 Hb_002482_050--Hb_013420_090 Hb_006040_050 Hb_006040_050 Hb_002482_050--Hb_006040_050 Hb_027357_010 Hb_027357_010 Hb_002482_050--Hb_027357_010 Hb_002687_070 Hb_002687_070 Hb_002482_050--Hb_002687_070 Hb_143004_010--Hb_021374_020 Hb_000789_210 Hb_000789_210 Hb_143004_010--Hb_000789_210 Hb_000668_030 Hb_000668_030 Hb_143004_010--Hb_000668_030 Hb_001115_060 Hb_001115_060 Hb_143004_010--Hb_001115_060 Hb_004984_090 Hb_004984_090 Hb_143004_010--Hb_004984_090 Hb_002281_060 Hb_002281_060 Hb_143004_010--Hb_002281_060 Hb_041813_050 Hb_041813_050 Hb_062192_060--Hb_041813_050 Hb_005154_090 Hb_005154_090 Hb_062192_060--Hb_005154_090 Hb_003362_020 Hb_003362_020 Hb_062192_060--Hb_003362_020 Hb_171685_030 Hb_171685_030 Hb_062192_060--Hb_171685_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0490742 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0878384 0.152015 0.180893 1.68053

CAGE analysis