Hb_000466_150

Information

Type -
Description -
Location Contig466: 341647-344205
Sequence    

Annotation

kegg
ID rcu:RCOM_0438710
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.10.1)
nr
ID KDP40125.1
description hypothetical protein JCGZ_02123 [Jatropha curcas]
swissprot
ID Q94AG2
description Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2
trembl
ID A0A067L6K0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02123 PE=4 SV=1
Gene Ontology
ID GO:0005524
description somatic embryogenesis receptor kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000466_150 0.0 - - hypothetical protein JCGZ_02123 [Jatropha curcas]
2 Hb_002161_020 0.1816634751 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
3 Hb_002173_080 0.1912454104 - - alcohol dehydrogenase, putative [Ricinus communis]
4 Hb_000109_110 0.1941398356 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
5 Hb_004097_080 0.196511521 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
6 Hb_001040_190 0.1986067847 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-2a-like [Jatropha curcas]
7 Hb_000059_100 0.1998426677 - - Basic blue protein, putative [Ricinus communis]
8 Hb_000264_270 0.2008113016 transcription factor TF Family: HSF -
9 Hb_004693_010 0.2028520303 - - hypothetical protein JCGZ_02321 [Jatropha curcas]
10 Hb_000318_440 0.2037777233 - - PREDICTED: allene oxide synthase 2-like [Jatropha curcas]
11 Hb_000127_250 0.2044335071 - - Alliin lyase precursor, putative [Ricinus communis]
12 Hb_022250_050 0.2047323653 - - conserved hypothetical protein [Ricinus communis]
13 Hb_058620_050 0.2057694092 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
14 Hb_003090_070 0.2063414771 - - PREDICTED: laccase-7 [Jatropha curcas]
15 Hb_058620_040 0.2067924981 - - Myrcene synthase, chloroplastic, putative isoform 1 [Theobroma cacao]
16 Hb_000141_070 0.2075823886 - - l-lactate dehydrogenase, putative [Ricinus communis]
17 Hb_003237_040 0.2102021967 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
18 Hb_002805_230 0.2104514847 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
19 Hb_159769_010 0.2105349594 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
20 Hb_012532_020 0.2108515044 - - Isoflavone reductase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000466_150 Hb_000466_150 Hb_002161_020 Hb_002161_020 Hb_000466_150--Hb_002161_020 Hb_002173_080 Hb_002173_080 Hb_000466_150--Hb_002173_080 Hb_000109_110 Hb_000109_110 Hb_000466_150--Hb_000109_110 Hb_004097_080 Hb_004097_080 Hb_000466_150--Hb_004097_080 Hb_001040_190 Hb_001040_190 Hb_000466_150--Hb_001040_190 Hb_000059_100 Hb_000059_100 Hb_000466_150--Hb_000059_100 Hb_012506_080 Hb_012506_080 Hb_002161_020--Hb_012506_080 Hb_022250_050 Hb_022250_050 Hb_002161_020--Hb_022250_050 Hb_001456_040 Hb_001456_040 Hb_002161_020--Hb_001456_040 Hb_002161_020--Hb_000109_110 Hb_000500_190 Hb_000500_190 Hb_002161_020--Hb_000500_190 Hb_004254_070 Hb_004254_070 Hb_002161_020--Hb_004254_070 Hb_039562_010 Hb_039562_010 Hb_002173_080--Hb_039562_010 Hb_003189_030 Hb_003189_030 Hb_002173_080--Hb_003189_030 Hb_000487_150 Hb_000487_150 Hb_002173_080--Hb_000487_150 Hb_003237_040 Hb_003237_040 Hb_002173_080--Hb_003237_040 Hb_000318_440 Hb_000318_440 Hb_002173_080--Hb_000318_440 Hb_002173_080--Hb_004097_080 Hb_000086_710 Hb_000086_710 Hb_000109_110--Hb_000086_710 Hb_009568_010 Hb_009568_010 Hb_000109_110--Hb_009568_010 Hb_003334_080 Hb_003334_080 Hb_000109_110--Hb_003334_080 Hb_109163_010 Hb_109163_010 Hb_000109_110--Hb_109163_010 Hb_001930_060 Hb_001930_060 Hb_000109_110--Hb_001930_060 Hb_002553_170 Hb_002553_170 Hb_000109_110--Hb_002553_170 Hb_058620_010 Hb_058620_010 Hb_004097_080--Hb_058620_010 Hb_135392_010 Hb_135392_010 Hb_004097_080--Hb_135392_010 Hb_000712_070 Hb_000712_070 Hb_004097_080--Hb_000712_070 Hb_004097_080--Hb_039562_010 Hb_004097_080--Hb_003334_080 Hb_001134_040 Hb_001134_040 Hb_004097_080--Hb_001134_040 Hb_058620_040 Hb_058620_040 Hb_001040_190--Hb_058620_040 Hb_001040_190--Hb_002553_170 Hb_001040_190--Hb_003334_080 Hb_058620_050 Hb_058620_050 Hb_001040_190--Hb_058620_050 Hb_000141_070 Hb_000141_070 Hb_001040_190--Hb_000141_070 Hb_004693_010 Hb_004693_010 Hb_001040_190--Hb_004693_010 Hb_003090_070 Hb_003090_070 Hb_000059_100--Hb_003090_070 Hb_005614_040 Hb_005614_040 Hb_000059_100--Hb_005614_040 Hb_002805_230 Hb_002805_230 Hb_000059_100--Hb_002805_230 Hb_000059_100--Hb_004693_010 Hb_000059_100--Hb_000318_440 Hb_007532_050 Hb_007532_050 Hb_000059_100--Hb_007532_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.697635 0.0384202 0.335725 0.491486 0.0774105 0.331861
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.110862 0 13.8387 0.17314

CAGE analysis