Hb_000327_140

Information

Type -
Description -
Location Contig327: 142277-146331
Sequence    

Annotation

kegg
ID vvi:104881081
description adenylate kinase 1, chloroplastic-like
nr
ID XP_012073625.1
description PREDICTED: probable adenylate kinase 6, chloroplastic [Jatropha curcas]
swissprot
ID Q9ZUU1
description Adenylate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=ADK PE=2 SV=1
trembl
ID A0A067LFU3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06654 PE=3 SV=1
Gene Ontology
ID GO:0004017
description probable adenylate kinase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34376: 142207-146055
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000327_140 0.0 - - PREDICTED: probable adenylate kinase 6, chloroplastic [Jatropha curcas]
2 Hb_000086_420 0.0533758194 - - PREDICTED: phospholipid--sterol O-acyltransferase [Jatropha curcas]
3 Hb_000029_060 0.0620840319 - - PREDICTED: mRNA-decapping enzyme-like protein [Jatropha curcas]
4 Hb_012239_020 0.0667836363 - - PREDICTED: protein VAC14 homolog [Jatropha curcas]
5 Hb_004994_240 0.0724880926 - - hypothetical protein PRUPE_ppa004633mg [Prunus persica]
6 Hb_000120_030 0.0729701214 - - PREDICTED: uncharacterized protein LOC105630385 isoform X1 [Jatropha curcas]
7 Hb_002232_480 0.0733087365 - - PREDICTED: telomerase reverse transcriptase [Jatropha curcas]
8 Hb_002110_080 0.0737923409 - - FH interacting protein 1 [Theobroma cacao]
9 Hb_011360_050 0.0776419931 - - PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Jatropha curcas]
10 Hb_001300_010 0.0824782293 transcription factor TF Family: C3H nucleic acid binding protein, putative [Ricinus communis]
11 Hb_001481_060 0.0839728615 - - PREDICTED: E3 ubiquitin-protein ligase HOS1 isoform X1 [Jatropha curcas]
12 Hb_002492_010 0.0855444834 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]
13 Hb_007839_020 0.0862370481 - - conserved hypothetical protein [Ricinus communis]
14 Hb_010407_080 0.0865871735 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 isoform X1 [Jatropha curcas]
15 Hb_000398_100 0.0868170388 - - Uncharacterized protein isoform 2 [Theobroma cacao]
16 Hb_001716_020 0.0886145633 - - hydrolase, putative [Ricinus communis]
17 Hb_000365_230 0.0887954737 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
18 Hb_000292_100 0.0888930204 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]
19 Hb_000738_020 0.0895426144 - - zinc finger protein, putative [Ricinus communis]
20 Hb_000347_400 0.0896189644 - - PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000327_140 Hb_000327_140 Hb_000086_420 Hb_000086_420 Hb_000327_140--Hb_000086_420 Hb_000029_060 Hb_000029_060 Hb_000327_140--Hb_000029_060 Hb_012239_020 Hb_012239_020 Hb_000327_140--Hb_012239_020 Hb_004994_240 Hb_004994_240 Hb_000327_140--Hb_004994_240 Hb_000120_030 Hb_000120_030 Hb_000327_140--Hb_000120_030 Hb_002232_480 Hb_002232_480 Hb_000327_140--Hb_002232_480 Hb_000086_420--Hb_000029_060 Hb_000086_420--Hb_012239_020 Hb_000086_420--Hb_004994_240 Hb_000292_100 Hb_000292_100 Hb_000086_420--Hb_000292_100 Hb_000738_020 Hb_000738_020 Hb_000086_420--Hb_000738_020 Hb_003849_110 Hb_003849_110 Hb_000029_060--Hb_003849_110 Hb_001716_020 Hb_001716_020 Hb_000029_060--Hb_001716_020 Hb_004916_010 Hb_004916_010 Hb_000029_060--Hb_004916_010 Hb_002110_080 Hb_002110_080 Hb_000029_060--Hb_002110_080 Hb_012239_020--Hb_000738_020 Hb_000484_130 Hb_000484_130 Hb_012239_020--Hb_000484_130 Hb_012239_020--Hb_004994_240 Hb_001300_010 Hb_001300_010 Hb_012239_020--Hb_001300_010 Hb_004994_240--Hb_001300_010 Hb_004994_240--Hb_002232_480 Hb_002492_010 Hb_002492_010 Hb_004994_240--Hb_002492_010 Hb_003398_080 Hb_003398_080 Hb_004994_240--Hb_003398_080 Hb_000856_040 Hb_000856_040 Hb_004994_240--Hb_000856_040 Hb_001699_010 Hb_001699_010 Hb_000120_030--Hb_001699_010 Hb_010287_020 Hb_010287_020 Hb_000120_030--Hb_010287_020 Hb_000120_030--Hb_000086_420 Hb_000120_030--Hb_004994_240 Hb_000363_120 Hb_000363_120 Hb_000120_030--Hb_000363_120 Hb_011360_050 Hb_011360_050 Hb_002232_480--Hb_011360_050 Hb_000802_090 Hb_000802_090 Hb_002232_480--Hb_000802_090 Hb_002232_480--Hb_001300_010 Hb_001366_090 Hb_001366_090 Hb_002232_480--Hb_001366_090 Hb_007017_040 Hb_007017_040 Hb_002232_480--Hb_007017_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.95441 37.2843 29.176 26.1959 12.7455 17.3198
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.1654 22.3555 17.0605 19.8444 20.5641

CAGE analysis