Hb_000297_150

Information

Type -
Description -
Location Contig297: 172650-174597
Sequence    

Annotation

kegg
ID cmo:103500908
description uncharacterized LOC103500908
nr
ID XP_008462583.1
description PREDICTED: uncharacterized protein LOC103500908 [Cucumis melo]
swissprot
ID -
description -
trembl
ID A0A0A0KKI7
description Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452720 PE=4 SV=1
Gene Ontology
ID GO:0031072
description chaperone protein dnaj-related isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000297_150 0.0 - - PREDICTED: uncharacterized protein LOC103500908 [Cucumis melo]
2 Hb_004241_020 0.0925808669 - - PREDICTED: DAG protein, chloroplastic-like [Jatropha curcas]
3 Hb_000340_100 0.1230822678 - - PREDICTED: protein PALE CRESS, chloroplastic [Jatropha curcas]
4 Hb_000465_190 0.1235283165 - - PREDICTED: E3 ubiquitin-protein ligase HOS1 isoform X2 [Jatropha curcas]
5 Hb_003747_230 0.1311060734 - - PREDICTED: uncharacterized protein LOC105630239 isoform X1 [Jatropha curcas]
6 Hb_000702_080 0.1311149599 - - PREDICTED: uncharacterized protein LOC105630492 [Jatropha curcas]
7 Hb_000173_250 0.1321576121 - - PREDICTED: ribonucleoside-diphosphate reductase small chain A [Jatropha curcas]
8 Hb_000580_150 0.1351307729 - - PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial [Jatropha curcas]
9 Hb_011689_120 0.1357019199 - - PREDICTED: uncharacterized protein At4g15545 [Jatropha curcas]
10 Hb_000462_090 0.140048144 - - PREDICTED: carotene epsilon-monooxygenase, chloroplastic [Jatropha curcas]
11 Hb_000510_290 0.1413343612 - - PREDICTED: protein OSB2, chloroplastic-like isoform X2 [Jatropha curcas]
12 Hb_000340_150 0.1432050605 - - hypothetical protein JCGZ_21975 [Jatropha curcas]
13 Hb_000107_570 0.1496918143 - - PREDICTED: uncharacterized protein LOC105634044 isoform X1 [Jatropha curcas]
14 Hb_000670_100 0.1505247858 - - PREDICTED: D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like [Jatropha curcas]
15 Hb_012627_040 0.1565569118 - - PREDICTED: uncharacterized protein LOC105641988 [Jatropha curcas]
16 Hb_011512_110 0.1568602199 - - PREDICTED: GDT1-like protein 2, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_000130_220 0.158600073 - - PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Jatropha curcas]
18 Hb_001322_110 0.1592959903 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000025_780 0.1593864063 - - PREDICTED: sanguinarine reductase [Jatropha curcas]
20 Hb_006846_150 0.1594350759 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000297_150 Hb_000297_150 Hb_004241_020 Hb_004241_020 Hb_000297_150--Hb_004241_020 Hb_000340_100 Hb_000340_100 Hb_000297_150--Hb_000340_100 Hb_000465_190 Hb_000465_190 Hb_000297_150--Hb_000465_190 Hb_003747_230 Hb_003747_230 Hb_000297_150--Hb_003747_230 Hb_000702_080 Hb_000702_080 Hb_000297_150--Hb_000702_080 Hb_000173_250 Hb_000173_250 Hb_000297_150--Hb_000173_250 Hb_004241_020--Hb_000702_080 Hb_004241_020--Hb_000173_250 Hb_000580_150 Hb_000580_150 Hb_004241_020--Hb_000580_150 Hb_004241_020--Hb_000465_190 Hb_009775_010 Hb_009775_010 Hb_004241_020--Hb_009775_010 Hb_000340_100--Hb_000465_190 Hb_000003_710 Hb_000003_710 Hb_000340_100--Hb_000003_710 Hb_000340_100--Hb_003747_230 Hb_001629_080 Hb_001629_080 Hb_000340_100--Hb_001629_080 Hb_005116_050 Hb_005116_050 Hb_000340_100--Hb_005116_050 Hb_002078_340 Hb_002078_340 Hb_000340_100--Hb_002078_340 Hb_005253_030 Hb_005253_030 Hb_000465_190--Hb_005253_030 Hb_002758_010 Hb_002758_010 Hb_000465_190--Hb_002758_010 Hb_000465_190--Hb_005116_050 Hb_000120_290 Hb_000120_290 Hb_000465_190--Hb_000120_290 Hb_002205_230 Hb_002205_230 Hb_000465_190--Hb_002205_230 Hb_002759_190 Hb_002759_190 Hb_003747_230--Hb_002759_190 Hb_000317_260 Hb_000317_260 Hb_003747_230--Hb_000317_260 Hb_001587_180 Hb_001587_180 Hb_003747_230--Hb_001587_180 Hb_005539_010 Hb_005539_010 Hb_003747_230--Hb_005539_010 Hb_004440_060 Hb_004440_060 Hb_003747_230--Hb_004440_060 Hb_000227_170 Hb_000227_170 Hb_003747_230--Hb_000227_170 Hb_005237_050 Hb_005237_050 Hb_000702_080--Hb_005237_050 Hb_000107_570 Hb_000107_570 Hb_000702_080--Hb_000107_570 Hb_002217_260 Hb_002217_260 Hb_000702_080--Hb_002217_260 Hb_000130_260 Hb_000130_260 Hb_000702_080--Hb_000130_260 Hb_019053_060 Hb_019053_060 Hb_000173_250--Hb_019053_060 Hb_000173_250--Hb_009775_010 Hb_000462_090 Hb_000462_090 Hb_000173_250--Hb_000462_090 Hb_011689_120 Hb_011689_120 Hb_000173_250--Hb_011689_120 Hb_000487_260 Hb_000487_260 Hb_000173_250--Hb_000487_260 Hb_006846_150 Hb_006846_150 Hb_000173_250--Hb_006846_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.54805 2.35653 5.41372 0.845013 2.23843 2.50375
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.80807 5.75287 4.05429 3.35151 10.0937

CAGE analysis