Hb_000189_230

Information

Type -
Description -
Location Contig189: 240773-242542
Sequence    

Annotation

kegg
ID rcu:RCOM_1427600
description aldo/keto reductase, putative (EC:1.1.1.65)
nr
ID EMT25314.1
description Auxin-induced protein [Aegilops tauschii]
swissprot
ID C6TBN2
description Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1
trembl
ID M8BTP4
description Auxin-induced protein OS=Aegilops tauschii GN=F775_06324 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000189_230 0.0 - - Auxin-induced protein [Aegilops tauschii]
2 Hb_002259_040 0.2176145732 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_010521_010 0.262669578 - - hypothetical protein CICLE_v10026841mg [Citrus clementina]
4 Hb_000608_060 0.2880615057 - - -
5 Hb_002299_050 0.2904646995 - - PREDICTED: chalcone--flavonone isomerase isoform X1 [Pyrus x bretschneideri]
6 Hb_000009_620 0.3004320441 - - zinc finger protein, putative [Ricinus communis]
7 Hb_030291_020 0.3118264555 - - PREDICTED: protein argonaute 5 isoform X2 [Jatropha curcas]
8 Hb_002232_450 0.312031782 - - PREDICTED: probable methyltransferase PMT11 [Jatropha curcas]
9 Hb_005389_110 0.312480685 - - PREDICTED: uncharacterized protein LOC105637756 [Jatropha curcas]
10 Hb_001965_010 0.3135816646 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
11 Hb_000380_200 0.3193484024 - - -
12 Hb_000828_040 0.3211136267 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
13 Hb_167300_010 0.3283198124 - - -
14 Hb_002407_080 0.3344799855 - - hypothetical protein JCGZ_00752 [Jatropha curcas]
15 Hb_004429_030 0.334824446 - - hypothetical protein POPTR_0010s16560g [Populus trichocarpa]
16 Hb_097968_010 0.3382278043 - - hypothetical protein PRUPE_ppa001143mg [Prunus persica]
17 Hb_000544_100 0.3388933313 - - hypothetical protein JCGZ_03636 [Jatropha curcas]
18 Hb_004342_030 0.339681636 - - phosphofructokinase [Hevea brasiliensis]
19 Hb_001524_090 0.3420059512 - - PREDICTED: uncharacterized protein LOC105113929 [Populus euphratica]
20 Hb_134894_010 0.3423682726 - - PREDICTED: E3 ubiquitin-protein ligase UPL5-like isoform X2 [Gossypium raimondii]

Gene co-expression network

sample Hb_000189_230 Hb_000189_230 Hb_002259_040 Hb_002259_040 Hb_000189_230--Hb_002259_040 Hb_010521_010 Hb_010521_010 Hb_000189_230--Hb_010521_010 Hb_000608_060 Hb_000608_060 Hb_000189_230--Hb_000608_060 Hb_002299_050 Hb_002299_050 Hb_000189_230--Hb_002299_050 Hb_000009_620 Hb_000009_620 Hb_000189_230--Hb_000009_620 Hb_030291_020 Hb_030291_020 Hb_000189_230--Hb_030291_020 Hb_002735_040 Hb_002735_040 Hb_002259_040--Hb_002735_040 Hb_105085_010 Hb_105085_010 Hb_002259_040--Hb_105085_010 Hb_116125_010 Hb_116125_010 Hb_002259_040--Hb_116125_010 Hb_002259_040--Hb_000608_060 Hb_000270_210 Hb_000270_210 Hb_002259_040--Hb_000270_210 Hb_000976_330 Hb_000976_330 Hb_010521_010--Hb_000976_330 Hb_000243_110 Hb_000243_110 Hb_010521_010--Hb_000243_110 Hb_000315_030 Hb_000315_030 Hb_010521_010--Hb_000315_030 Hb_010810_090 Hb_010810_090 Hb_010521_010--Hb_010810_090 Hb_000089_150 Hb_000089_150 Hb_010521_010--Hb_000089_150 Hb_000608_060--Hb_000009_620 Hb_000252_250 Hb_000252_250 Hb_000608_060--Hb_000252_250 Hb_011218_080 Hb_011218_080 Hb_000608_060--Hb_011218_080 Hb_002025_310 Hb_002025_310 Hb_000608_060--Hb_002025_310 Hb_000608_060--Hb_002299_050 Hb_001587_010 Hb_001587_010 Hb_002299_050--Hb_001587_010 Hb_065525_030 Hb_065525_030 Hb_002299_050--Hb_065525_030 Hb_000984_050 Hb_000984_050 Hb_002299_050--Hb_000984_050 Hb_001278_070 Hb_001278_070 Hb_002299_050--Hb_001278_070 Hb_005273_040 Hb_005273_040 Hb_002299_050--Hb_005273_040 Hb_002407_080 Hb_002407_080 Hb_002299_050--Hb_002407_080 Hb_001856_010 Hb_001856_010 Hb_000009_620--Hb_001856_010 Hb_028872_060 Hb_028872_060 Hb_000009_620--Hb_028872_060 Hb_000828_040 Hb_000828_040 Hb_000009_620--Hb_000828_040 Hb_000009_620--Hb_002407_080 Hb_004342_030 Hb_004342_030 Hb_000009_620--Hb_004342_030 Hb_114310_040 Hb_114310_040 Hb_000009_620--Hb_114310_040 Hb_000392_100 Hb_000392_100 Hb_030291_020--Hb_000392_100 Hb_015401_030 Hb_015401_030 Hb_030291_020--Hb_015401_030 Hb_007603_010 Hb_007603_010 Hb_030291_020--Hb_007603_010 Hb_139859_010 Hb_139859_010 Hb_030291_020--Hb_139859_010 Hb_005914_090 Hb_005914_090 Hb_030291_020--Hb_005914_090 Hb_000103_360 Hb_000103_360 Hb_030291_020--Hb_000103_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.190451 0.0466515 0 0 0.096674 0.304108
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0834978 0.405629 0

CAGE analysis