Hb_011218_080

Information

Type -
Description -
Location Contig11218: 65859-73167
Sequence    

Annotation

kegg
ID rcu:RCOM_1439520
description glutathione-s-transferase theta, gst, putative (EC:2.5.1.18)
nr
ID XP_002531867.1
description glutathione-s-transferase theta, gst, putative [Ricinus communis]
swissprot
ID P30109
description Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1
trembl
ID B9T0U8
description Glutathione-s-transferase theta, gst, putative OS=Ricinus communis GN=RCOM_1439520 PE=3 SV=1
Gene Ontology
ID GO:0004364
description glutathione s-transferase f13

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03675: 65839-67044
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011218_080 0.0 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
2 Hb_002820_040 0.1145981955 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007416_310 0.1148545146 - - PREDICTED: zinc finger protein 622 [Jatropha curcas]
4 Hb_004608_020 0.1174275176 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
5 Hb_114310_040 0.1196330847 - - PREDICTED: purple acid phosphatase 2-like [Jatropha curcas]
6 Hb_002675_060 0.1202525858 - - PREDICTED: uncharacterized protein LOC105634954 isoform X2 [Jatropha curcas]
7 Hb_002725_070 0.1214271056 - - hypothetical protein PRUPE_ppa005949mg [Prunus persica]
8 Hb_117950_020 0.1218124854 desease resistance Gene Name: NB-ARC PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Jatropha curcas]
9 Hb_000078_100 0.1223174091 - - PREDICTED: topless-related protein 4-like isoform X2 [Jatropha curcas]
10 Hb_001221_040 0.1275359905 - - PREDICTED: nucleolar protein 56-like [Jatropha curcas]
11 Hb_011861_070 0.1275767568 - - F-box/LRR-repeat protein, putative [Ricinus communis]
12 Hb_000814_090 0.1310112035 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000236_320 0.1337961904 - - PREDICTED: ER membrane protein complex subunit 8/9 homolog [Jatropha curcas]
14 Hb_000631_150 0.1358956506 - - PREDICTED: RNA polymerase-associated protein LEO1 [Jatropha curcas]
15 Hb_000116_170 0.1366605727 - - hypothetical protein JCGZ_22392 [Jatropha curcas]
16 Hb_153547_010 0.1371038857 - - PREDICTED: protein FLX-like 4 [Jatropha curcas]
17 Hb_000317_440 0.1372083919 - - PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X2 [Jatropha curcas]
18 Hb_001433_190 0.1375691963 - - PREDICTED: eukaryotic translation initiation factor 3 subunit A [Jatropha curcas]
19 Hb_009118_010 0.1383971294 - - methionine aminopeptidase, putative [Ricinus communis]
20 Hb_002883_010 0.1393899286 - - PREDICTED: putative methyltransferase NSUN6 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_011218_080 Hb_011218_080 Hb_002820_040 Hb_002820_040 Hb_011218_080--Hb_002820_040 Hb_007416_310 Hb_007416_310 Hb_011218_080--Hb_007416_310 Hb_004608_020 Hb_004608_020 Hb_011218_080--Hb_004608_020 Hb_114310_040 Hb_114310_040 Hb_011218_080--Hb_114310_040 Hb_002675_060 Hb_002675_060 Hb_011218_080--Hb_002675_060 Hb_002725_070 Hb_002725_070 Hb_011218_080--Hb_002725_070 Hb_000318_140 Hb_000318_140 Hb_002820_040--Hb_000318_140 Hb_002820_040--Hb_002725_070 Hb_006913_040 Hb_006913_040 Hb_002820_040--Hb_006913_040 Hb_000078_100 Hb_000078_100 Hb_002820_040--Hb_000078_100 Hb_002820_040--Hb_007416_310 Hb_000645_150 Hb_000645_150 Hb_002820_040--Hb_000645_150 Hb_002235_320 Hb_002235_320 Hb_007416_310--Hb_002235_320 Hb_001019_170 Hb_001019_170 Hb_007416_310--Hb_001019_170 Hb_002652_040 Hb_002652_040 Hb_007416_310--Hb_002652_040 Hb_007416_310--Hb_002725_070 Hb_000331_190 Hb_000331_190 Hb_007416_310--Hb_000331_190 Hb_009118_010 Hb_009118_010 Hb_004608_020--Hb_009118_010 Hb_000631_150 Hb_000631_150 Hb_004608_020--Hb_000631_150 Hb_000116_170 Hb_000116_170 Hb_004608_020--Hb_000116_170 Hb_000457_060 Hb_000457_060 Hb_004608_020--Hb_000457_060 Hb_000017_340 Hb_000017_340 Hb_004608_020--Hb_000017_340 Hb_004608_020--Hb_000078_100 Hb_000920_270 Hb_000920_270 Hb_114310_040--Hb_000920_270 Hb_002078_420 Hb_002078_420 Hb_114310_040--Hb_002078_420 Hb_011861_070 Hb_011861_070 Hb_114310_040--Hb_011861_070 Hb_004096_080 Hb_004096_080 Hb_114310_040--Hb_004096_080 Hb_005052_010 Hb_005052_010 Hb_114310_040--Hb_005052_010 Hb_001221_040 Hb_001221_040 Hb_002675_060--Hb_001221_040 Hb_000213_070 Hb_000213_070 Hb_002675_060--Hb_000213_070 Hb_000035_040 Hb_000035_040 Hb_002675_060--Hb_000035_040 Hb_002675_060--Hb_002652_040 Hb_002942_080 Hb_002942_080 Hb_002675_060--Hb_002942_080 Hb_002675_060--Hb_000331_190 Hb_005295_040 Hb_005295_040 Hb_002725_070--Hb_005295_040 Hb_042083_070 Hb_042083_070 Hb_002725_070--Hb_042083_070 Hb_000814_090 Hb_000814_090 Hb_002725_070--Hb_000814_090 Hb_002725_070--Hb_000078_100 Hb_117950_020 Hb_117950_020 Hb_002725_070--Hb_117950_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.67018 2.67647 1.51205 0.645897 8.254 7.69148
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.22268 1.34746 1.96774 5.4399 0.48699

CAGE analysis