Hb_004608_020

Information

Type -
Description -
Location Contig4608: 49145-58656
Sequence    

Annotation

kegg
ID rcu:RCOM_0623200
description leucine aminopeptidase, putative (EC:3.4.11.5)
nr
ID XP_012071507.1
description PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
swissprot
ID Q944P7
description Leucine aminopeptidase 3, chloroplastic OS=Arabidopsis thaliana GN=At4g30920 PE=2 SV=2
trembl
ID A0A067L3M2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04032 PE=3 SV=1
Gene Ontology
ID GO:0005737
description leucine aminopeptidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43731: 49223-58660
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004608_020 0.0 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
2 Hb_009118_010 0.0654483929 - - methionine aminopeptidase, putative [Ricinus communis]
3 Hb_000631_150 0.0657544887 - - PREDICTED: RNA polymerase-associated protein LEO1 [Jatropha curcas]
4 Hb_000116_170 0.0664896781 - - hypothetical protein JCGZ_22392 [Jatropha curcas]
5 Hb_000457_060 0.0701854281 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
6 Hb_000017_340 0.0749400545 - - PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Phoenix dactylifera]
7 Hb_000078_100 0.0751201084 - - PREDICTED: topless-related protein 4-like isoform X2 [Jatropha curcas]
8 Hb_000317_440 0.0842588619 - - PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X2 [Jatropha curcas]
9 Hb_004881_050 0.0873307955 - - PREDICTED: obg-like ATPase 1 [Jatropha curcas]
10 Hb_000814_090 0.0880813863 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000370_030 0.0901838209 - - PREDICTED: uncharacterized protein LOC105639493 [Jatropha curcas]
12 Hb_000568_040 0.0904913232 - - PREDICTED: mRNA-decapping enzyme subunit 2 [Jatropha curcas]
13 Hb_117950_020 0.0927015949 desease resistance Gene Name: NB-ARC PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Jatropha curcas]
14 Hb_001221_040 0.0929193273 - - PREDICTED: nucleolar protein 56-like [Jatropha curcas]
15 Hb_002725_070 0.0930392384 - - hypothetical protein PRUPE_ppa005949mg [Prunus persica]
16 Hb_007407_040 0.0949456562 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_031754_010 0.0967584727 transcription factor TF Family: LIM zinc ion binding protein, putative [Ricinus communis]
18 Hb_000335_010 0.0976446347 - - WD-repeat protein, putative [Ricinus communis]
19 Hb_000849_100 0.0989668401 - - PREDICTED: uncharacterized protein LOC105644134 [Jatropha curcas]
20 Hb_006922_080 0.0997510088 - - PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Glycine max]

Gene co-expression network

sample Hb_004608_020 Hb_004608_020 Hb_009118_010 Hb_009118_010 Hb_004608_020--Hb_009118_010 Hb_000631_150 Hb_000631_150 Hb_004608_020--Hb_000631_150 Hb_000116_170 Hb_000116_170 Hb_004608_020--Hb_000116_170 Hb_000457_060 Hb_000457_060 Hb_004608_020--Hb_000457_060 Hb_000017_340 Hb_000017_340 Hb_004608_020--Hb_000017_340 Hb_000078_100 Hb_000078_100 Hb_004608_020--Hb_000078_100 Hb_003602_040 Hb_003602_040 Hb_009118_010--Hb_003602_040 Hb_000012_090 Hb_000012_090 Hb_009118_010--Hb_000012_090 Hb_000322_050 Hb_000322_050 Hb_009118_010--Hb_000322_050 Hb_003434_060 Hb_003434_060 Hb_009118_010--Hb_003434_060 Hb_000956_030 Hb_000956_030 Hb_009118_010--Hb_000956_030 Hb_000317_440 Hb_000317_440 Hb_000631_150--Hb_000317_440 Hb_000134_360 Hb_000134_360 Hb_000631_150--Hb_000134_360 Hb_000849_100 Hb_000849_100 Hb_000631_150--Hb_000849_100 Hb_000318_140 Hb_000318_140 Hb_000631_150--Hb_000318_140 Hb_031754_010 Hb_031754_010 Hb_000631_150--Hb_031754_010 Hb_000116_170--Hb_000631_150 Hb_006922_080 Hb_006922_080 Hb_000116_170--Hb_006922_080 Hb_025557_020 Hb_025557_020 Hb_000116_170--Hb_025557_020 Hb_000116_170--Hb_000849_100 Hb_000116_170--Hb_009118_010 Hb_000335_010 Hb_000335_010 Hb_000457_060--Hb_000335_010 Hb_004881_050 Hb_004881_050 Hb_000457_060--Hb_004881_050 Hb_000370_030 Hb_000370_030 Hb_000457_060--Hb_000370_030 Hb_000789_080 Hb_000789_080 Hb_000457_060--Hb_000789_080 Hb_000457_060--Hb_000631_150 Hb_005288_120 Hb_005288_120 Hb_000017_340--Hb_005288_120 Hb_000568_040 Hb_000568_040 Hb_000017_340--Hb_000568_040 Hb_000017_340--Hb_000370_030 Hb_063047_010 Hb_063047_010 Hb_000017_340--Hb_063047_010 Hb_000703_080 Hb_000703_080 Hb_000017_340--Hb_000703_080 Hb_002725_070 Hb_002725_070 Hb_000078_100--Hb_002725_070 Hb_117950_020 Hb_117950_020 Hb_000078_100--Hb_117950_020 Hb_002820_040 Hb_002820_040 Hb_000078_100--Hb_002820_040 Hb_000078_100--Hb_000631_150 Hb_005635_010 Hb_005635_010 Hb_000078_100--Hb_005635_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
273.952 91.8569 38.4618 68.6074 331.794 384.448
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
234.171 72.1425 129.52 171.142 48.3013

CAGE analysis