Hb_000370_030

Information

Type -
Description -
Location Contig370: 57168-61264
Sequence    

Annotation

kegg
ID rcu:RCOM_0813110
description hypothetical protein
nr
ID XP_012078960.1
description PREDICTED: uncharacterized protein LOC105639493 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KKE0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14790 PE=4 SV=1
Gene Ontology
ID GO:0005777
description endonuclease or glycosyl hydrolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38028: 57173-61635
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000370_030 0.0 - - PREDICTED: uncharacterized protein LOC105639493 [Jatropha curcas]
2 Hb_000184_130 0.0564988509 - - PREDICTED: uncharacterized protein LOC105641544 isoform X1 [Jatropha curcas]
3 Hb_000300_280 0.062468275 - - PREDICTED: BTB/POZ and MATH domain-containing protein 4 isoform X1 [Jatropha curcas]
4 Hb_000457_060 0.0690047926 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
5 Hb_004310_060 0.0774947295 - - PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Jatropha curcas]
6 Hb_000568_040 0.0794800703 - - PREDICTED: mRNA-decapping enzyme subunit 2 [Jatropha curcas]
7 Hb_000316_030 0.0802116976 - - zinc finger protein, putative [Ricinus communis]
8 Hb_001943_010 0.0809313502 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
9 Hb_000017_340 0.082029241 - - PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Phoenix dactylifera]
10 Hb_000915_050 0.0830191897 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000390_060 0.0833406772 - - PREDICTED: F-box/kelch-repeat protein At5g60570-like [Jatropha curcas]
12 Hb_000120_800 0.0843408296 - - PREDICTED: rab proteins geranylgeranyltransferase component A [Jatropha curcas]
13 Hb_003362_040 0.084529673 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
14 Hb_003602_040 0.084869502 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
15 Hb_001040_160 0.0852395479 - - glutaredoxin, grx, putative [Ricinus communis]
16 Hb_004204_020 0.0854592512 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105640780 [Jatropha curcas]
17 Hb_000866_030 0.0866141362 - - hypothetical protein RCOM_1615820 [Ricinus communis]
18 Hb_001019_170 0.0869276811 - - PREDICTED: uncharacterized protein LOC105639322 [Jatropha curcas]
19 Hb_027028_020 0.0870411763 - - PREDICTED: uncharacterized protein LOC105633192 [Jatropha curcas]
20 Hb_063047_010 0.087455768 - - peroxisomal targeting signal type 1 (pts1) receptor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000370_030 Hb_000370_030 Hb_000184_130 Hb_000184_130 Hb_000370_030--Hb_000184_130 Hb_000300_280 Hb_000300_280 Hb_000370_030--Hb_000300_280 Hb_000457_060 Hb_000457_060 Hb_000370_030--Hb_000457_060 Hb_004310_060 Hb_004310_060 Hb_000370_030--Hb_004310_060 Hb_000568_040 Hb_000568_040 Hb_000370_030--Hb_000568_040 Hb_000316_030 Hb_000316_030 Hb_000370_030--Hb_000316_030 Hb_000915_050 Hb_000915_050 Hb_000184_130--Hb_000915_050 Hb_004204_020 Hb_004204_020 Hb_000184_130--Hb_004204_020 Hb_003362_040 Hb_003362_040 Hb_000184_130--Hb_003362_040 Hb_002039_010 Hb_002039_010 Hb_000184_130--Hb_002039_010 Hb_004734_060 Hb_004734_060 Hb_000184_130--Hb_004734_060 Hb_000300_280--Hb_004310_060 Hb_000879_140 Hb_000879_140 Hb_000300_280--Hb_000879_140 Hb_003728_030 Hb_003728_030 Hb_000300_280--Hb_003728_030 Hb_000300_280--Hb_000184_130 Hb_000373_270 Hb_000373_270 Hb_000300_280--Hb_000373_270 Hb_000335_010 Hb_000335_010 Hb_000457_060--Hb_000335_010 Hb_004881_050 Hb_004881_050 Hb_000457_060--Hb_004881_050 Hb_004608_020 Hb_004608_020 Hb_000457_060--Hb_004608_020 Hb_000789_080 Hb_000789_080 Hb_000457_060--Hb_000789_080 Hb_000631_150 Hb_000631_150 Hb_000457_060--Hb_000631_150 Hb_005147_110 Hb_005147_110 Hb_004310_060--Hb_005147_110 Hb_008725_250 Hb_008725_250 Hb_004310_060--Hb_008725_250 Hb_004310_060--Hb_000879_140 Hb_005914_230 Hb_005914_230 Hb_004310_060--Hb_005914_230 Hb_018663_020 Hb_018663_020 Hb_004310_060--Hb_018663_020 Hb_007317_190 Hb_007317_190 Hb_000568_040--Hb_007317_190 Hb_001040_160 Hb_001040_160 Hb_000568_040--Hb_001040_160 Hb_000017_340 Hb_000017_340 Hb_000568_040--Hb_000017_340 Hb_002067_150 Hb_002067_150 Hb_000568_040--Hb_002067_150 Hb_001307_140 Hb_001307_140 Hb_000568_040--Hb_001307_140 Hb_000316_030--Hb_001040_160 Hb_003434_060 Hb_003434_060 Hb_000316_030--Hb_003434_060 Hb_000390_060 Hb_000390_060 Hb_000316_030--Hb_000390_060 Hb_001609_010 Hb_001609_010 Hb_000316_030--Hb_001609_010 Hb_063047_010 Hb_063047_010 Hb_000316_030--Hb_063047_010 Hb_002097_090 Hb_002097_090 Hb_000316_030--Hb_002097_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
55.2899 21.665 6.33755 14.8301 39.7966 68.2497
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
41.2044 17.6018 29.3678 24.5258 9.47476

CAGE analysis