Hb_000139_120

Information

Type -
Description -
Location Contig139: 149961-151840
Sequence    

Annotation

kegg
ID rcu:RCOM_0914020
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_002517214.1
description sugar transporter, putative [Ricinus communis]
swissprot
ID Q9SBA7
description Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2
trembl
ID B9RTZ5
description Sugar transporter, putative OS=Ricinus communis GN=RCOM_0914020 PE=3 SV=1
Gene Ontology
ID GO:0016021
description sugar transport protein 8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000139_120 0.0 - - sugar transporter, putative [Ricinus communis]
2 Hb_017387_030 0.2006103984 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
3 Hb_005618_060 0.2015875965 transcription factor TF Family: bHLH hypothetical protein RCOM_1343120 [Ricinus communis]
4 Hb_000424_090 0.2028198552 - - PREDICTED: fatty-acid-binding protein 2 [Jatropha curcas]
5 Hb_000245_160 0.2332783604 - - PREDICTED: mavicyanin [Jatropha curcas]
6 Hb_027402_030 0.2350919938 - - PREDICTED: probable carboxylesterase 17 [Jatropha curcas]
7 Hb_010931_060 0.2850665875 - - hypothetical protein JCGZ_03001 [Jatropha curcas]
8 Hb_182249_010 0.2856781942 - - -
9 Hb_000665_220 0.2864425048 - - catalytic, putative [Ricinus communis]
10 Hb_002321_040 0.2941425948 - - hypothetical protein POPTR_0019s14030g [Populus trichocarpa]
11 Hb_000808_120 0.2950150894 - - -
12 Hb_013834_010 0.2993741057 - - PREDICTED: kinesin-like protein NACK2 [Jatropha curcas]
13 Hb_007765_070 0.3038789288 - - PREDICTED: mitochondrial uncoupling protein 2 [Jatropha curcas]
14 Hb_071781_010 0.3054223282 - - hypothetical protein POPTR_0010s13190g [Populus trichocarpa]
15 Hb_000174_050 0.3102210122 - - PREDICTED: gamma-tubulin complex component 2 [Populus euphratica]
16 Hb_091761_010 0.3108913079 - - Rhomboid protein, putative [Ricinus communis]
17 Hb_002942_170 0.3125035671 - - acyl carrier protein, putative [Ricinus communis]
18 Hb_057247_010 0.3138588162 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
19 Hb_006816_330 0.3154944578 - - exonuclease, putative [Ricinus communis]
20 Hb_009620_090 0.315643574 - - hypothetical protein L484_000980 [Morus notabilis]

Gene co-expression network

sample Hb_000139_120 Hb_000139_120 Hb_017387_030 Hb_017387_030 Hb_000139_120--Hb_017387_030 Hb_005618_060 Hb_005618_060 Hb_000139_120--Hb_005618_060 Hb_000424_090 Hb_000424_090 Hb_000139_120--Hb_000424_090 Hb_000245_160 Hb_000245_160 Hb_000139_120--Hb_000245_160 Hb_027402_030 Hb_027402_030 Hb_000139_120--Hb_027402_030 Hb_010931_060 Hb_010931_060 Hb_000139_120--Hb_010931_060 Hb_017387_030--Hb_027402_030 Hb_017387_030--Hb_005618_060 Hb_017387_030--Hb_000245_160 Hb_005883_040 Hb_005883_040 Hb_017387_030--Hb_005883_040 Hb_134956_010 Hb_134956_010 Hb_017387_030--Hb_134956_010 Hb_000979_010 Hb_000979_010 Hb_005618_060--Hb_000979_010 Hb_001367_010 Hb_001367_010 Hb_005618_060--Hb_001367_010 Hb_002570_010 Hb_002570_010 Hb_005618_060--Hb_002570_010 Hb_007765_070 Hb_007765_070 Hb_005618_060--Hb_007765_070 Hb_091761_010 Hb_091761_010 Hb_005618_060--Hb_091761_010 Hb_000424_090--Hb_010931_060 Hb_000365_170 Hb_000365_170 Hb_000424_090--Hb_000365_170 Hb_000424_090--Hb_005618_060 Hb_000424_090--Hb_007765_070 Hb_008994_010 Hb_008994_010 Hb_000424_090--Hb_008994_010 Hb_001442_030 Hb_001442_030 Hb_000245_160--Hb_001442_030 Hb_162040_010 Hb_162040_010 Hb_000245_160--Hb_162040_010 Hb_124961_010 Hb_124961_010 Hb_000245_160--Hb_124961_010 Hb_070469_010 Hb_070469_010 Hb_000245_160--Hb_070469_010 Hb_000245_160--Hb_005883_040 Hb_005181_020 Hb_005181_020 Hb_027402_030--Hb_005181_020 Hb_101393_010 Hb_101393_010 Hb_027402_030--Hb_101393_010 Hb_141199_010 Hb_141199_010 Hb_027402_030--Hb_141199_010 Hb_007904_050 Hb_007904_050 Hb_027402_030--Hb_007904_050 Hb_006816_330 Hb_006816_330 Hb_010931_060--Hb_006816_330 Hb_066967_020 Hb_066967_020 Hb_010931_060--Hb_066967_020 Hb_002105_010 Hb_002105_010 Hb_010931_060--Hb_002105_010 Hb_000694_030 Hb_000694_030 Hb_010931_060--Hb_000694_030 Hb_004994_320 Hb_004994_320 Hb_010931_060--Hb_004994_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.267339 0.0218892 1.23212 0.770447 0.280257 0.855532
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0710884 0 0.0378182 0.0496377

CAGE analysis