Hb_000103_190

Information

Type -
Description -
Location Contig103: 158457-162694
Sequence    

Annotation

kegg
ID pop:POPTR_0010s09280g
description POPTRDRAFT_804996; hypothetical protein
nr
ID XP_012069690.1
description PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
swissprot
ID Q9SV13
description Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1
trembl
ID A0A067KZ67
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02221 PE=4 SV=1
Gene Ontology
ID GO:0009507
description sulfate transporter -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000103_190 0.0 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
2 Hb_001016_040 0.1584065981 transcription factor TF Family: Orphans PREDICTED: histidine kinase 1 isoform X1 [Jatropha curcas]
3 Hb_103149_010 0.1588772864 - - hypothetical protein CISIN_1g0397312mg, partial [Citrus sinensis]
4 Hb_009476_160 0.1739010265 - - RING-H2 finger protein ATL2N, putative [Ricinus communis]
5 Hb_000733_090 0.175041146 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
6 Hb_000497_170 0.1838065944 - - PREDICTED: uncharacterized protein LOC105647275 [Jatropha curcas]
7 Hb_015884_010 0.1891057599 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
8 Hb_000365_040 0.1924011456 - - PREDICTED: uncharacterized protein LOC105649097 [Jatropha curcas]
9 Hb_000604_050 0.1944545473 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
10 Hb_001357_030 0.1995828231 - - hypothetical protein F383_04880 [Gossypium arboreum]
11 Hb_000692_230 0.2007259191 - - phospholipase d delta, putative [Ricinus communis]
12 Hb_186495_010 0.2027481993 - - Phosphoprotein phosphatase [Theobroma cacao]
13 Hb_004586_230 0.205266322 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003939_090 0.2060187586 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
15 Hb_005396_030 0.2061881515 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000638_180 0.2077784448 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
17 Hb_000714_070 0.2096304026 transcription factor TF Family: LOB hypothetical protein JCGZ_14754 [Jatropha curcas]
18 Hb_003906_150 0.2115482029 - - peptidoglycan-binding LysM domain-containing family protein, partial [Populus trichocarpa]
19 Hb_002783_210 0.2125715527 - - PREDICTED: uncharacterized protein LOC105635341 [Jatropha curcas]
20 Hb_000705_070 0.2129196571 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000103_190 Hb_000103_190 Hb_001016_040 Hb_001016_040 Hb_000103_190--Hb_001016_040 Hb_103149_010 Hb_103149_010 Hb_000103_190--Hb_103149_010 Hb_009476_160 Hb_009476_160 Hb_000103_190--Hb_009476_160 Hb_000733_090 Hb_000733_090 Hb_000103_190--Hb_000733_090 Hb_000497_170 Hb_000497_170 Hb_000103_190--Hb_000497_170 Hb_015884_010 Hb_015884_010 Hb_000103_190--Hb_015884_010 Hb_001016_040--Hb_015884_010 Hb_001016_040--Hb_103149_010 Hb_186495_010 Hb_186495_010 Hb_001016_040--Hb_186495_010 Hb_001016_040--Hb_009476_160 Hb_005396_030 Hb_005396_030 Hb_001016_040--Hb_005396_030 Hb_000732_100 Hb_000732_100 Hb_001016_040--Hb_000732_100 Hb_000604_050 Hb_000604_050 Hb_103149_010--Hb_000604_050 Hb_103149_010--Hb_000733_090 Hb_000702_040 Hb_000702_040 Hb_103149_010--Hb_000702_040 Hb_004586_230 Hb_004586_230 Hb_103149_010--Hb_004586_230 Hb_003939_090 Hb_003939_090 Hb_103149_010--Hb_003939_090 Hb_004282_040 Hb_004282_040 Hb_009476_160--Hb_004282_040 Hb_000638_180 Hb_000638_180 Hb_009476_160--Hb_000638_180 Hb_000692_230 Hb_000692_230 Hb_009476_160--Hb_000692_230 Hb_009476_160--Hb_004586_230 Hb_002004_010 Hb_002004_010 Hb_009476_160--Hb_002004_010 Hb_049915_010 Hb_049915_010 Hb_000733_090--Hb_049915_010 Hb_003952_080 Hb_003952_080 Hb_000733_090--Hb_003952_080 Hb_000733_090--Hb_000692_230 Hb_000733_090--Hb_000604_050 Hb_008406_030 Hb_008406_030 Hb_000733_090--Hb_008406_030 Hb_103541_010 Hb_103541_010 Hb_000497_170--Hb_103541_010 Hb_001587_220 Hb_001587_220 Hb_000497_170--Hb_001587_220 Hb_000090_020 Hb_000090_020 Hb_000497_170--Hb_000090_020 Hb_000497_170--Hb_000638_180 Hb_012553_030 Hb_012553_030 Hb_000497_170--Hb_012553_030 Hb_000497_170--Hb_000732_100 Hb_015884_010--Hb_012553_030 Hb_015884_010--Hb_003939_090 Hb_010642_010 Hb_010642_010 Hb_015884_010--Hb_010642_010 Hb_000714_070 Hb_000714_070 Hb_015884_010--Hb_000714_070 Hb_015884_010--Hb_103541_010 Hb_000468_050 Hb_000468_050 Hb_015884_010--Hb_000468_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.473609 0.0763982 0.781546 0.0375374 0.0184237
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0679725 0.08559 0.0757509

CAGE analysis