Hb_000732_100

Information

Type -
Description -
Location Contig732: 106259-107854
Sequence    

Annotation

kegg
ID rcu:RCOM_1096480
description ATP binding protein, putative
nr
ID XP_012091468.1
description PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JAS3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21338 PE=4 SV=1
Gene Ontology
ID GO:0009987
description octicosapeptide phox bem1p family isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56117: 106278-107985
cDNA
(Sanger)
(ID:Location)		 005_G15.ab1: 107065-107985 , 007_P06.ab1: 107124-107985

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_100 0.0 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
2 Hb_000537_090 0.0668952868 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001318_230 0.0676601986 - - Boron transporter, putative [Ricinus communis]
4 Hb_114733_010 0.0871297985 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
5 Hb_001269_530 0.0965982443 - - ATP-binding cassette transporter, putative [Ricinus communis]
6 Hb_000090_020 0.10159742 - - acyltransferase, putative [Ricinus communis]
7 Hb_173107_020 0.1019947153 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
8 Hb_002598_020 0.1040615457 - - PREDICTED: sugar transporter ERD6-like 5 [Populus euphratica]
9 Hb_000816_150 0.1067239073 - - oligopeptide transporter, putative [Ricinus communis]
10 Hb_000991_080 0.1068298689 - - kinase, putative [Ricinus communis]
11 Hb_000384_020 0.1125018601 - - sucrose phosphate syntase, putative [Ricinus communis]
12 Hb_103541_010 0.1129541973 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
13 Hb_001913_030 0.113415382 - - ankyrin repeat protein [Bruguiera gymnorhiza]
14 Hb_000638_180 0.1179870787 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
15 Hb_015884_010 0.121693174 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
16 Hb_000816_050 0.1229303092 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
17 Hb_000468_050 0.1235663197 - - -
18 Hb_017700_030 0.1241085342 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
19 Hb_007292_050 0.1254750834 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
20 Hb_001013_080 0.1278903026 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]

Gene co-expression network

sample Hb_000732_100 Hb_000732_100 Hb_000537_090 Hb_000537_090 Hb_000732_100--Hb_000537_090 Hb_001318_230 Hb_001318_230 Hb_000732_100--Hb_001318_230 Hb_114733_010 Hb_114733_010 Hb_000732_100--Hb_114733_010 Hb_001269_530 Hb_001269_530 Hb_000732_100--Hb_001269_530 Hb_000090_020 Hb_000090_020 Hb_000732_100--Hb_000090_020 Hb_173107_020 Hb_173107_020 Hb_000732_100--Hb_173107_020 Hb_001913_030 Hb_001913_030 Hb_000537_090--Hb_001913_030 Hb_002598_020 Hb_002598_020 Hb_000537_090--Hb_002598_020 Hb_000537_090--Hb_001269_530 Hb_000537_090--Hb_001318_230 Hb_001013_080 Hb_001013_080 Hb_000537_090--Hb_001013_080 Hb_001907_050 Hb_001907_050 Hb_001318_230--Hb_001907_050 Hb_001318_230--Hb_002598_020 Hb_001318_230--Hb_000090_020 Hb_004785_170 Hb_004785_170 Hb_001318_230--Hb_004785_170 Hb_000384_020 Hb_000384_020 Hb_114733_010--Hb_000384_020 Hb_114733_010--Hb_173107_020 Hb_000816_150 Hb_000816_150 Hb_114733_010--Hb_000816_150 Hb_017700_030 Hb_017700_030 Hb_114733_010--Hb_017700_030 Hb_000991_080 Hb_000991_080 Hb_114733_010--Hb_000991_080 Hb_001269_530--Hb_001913_030 Hb_002335_010 Hb_002335_010 Hb_001269_530--Hb_002335_010 Hb_000589_330 Hb_000589_330 Hb_001269_530--Hb_000589_330 Hb_001269_530--Hb_173107_020 Hb_103541_010 Hb_103541_010 Hb_000090_020--Hb_103541_010 Hb_012553_030 Hb_012553_030 Hb_000090_020--Hb_012553_030 Hb_000090_020--Hb_002598_020 Hb_000090_020--Hb_000537_090 Hb_173107_020--Hb_000384_020 Hb_002250_140 Hb_002250_140 Hb_173107_020--Hb_002250_140 Hb_173107_020--Hb_000991_080 Hb_009771_040 Hb_009771_040 Hb_173107_020--Hb_009771_040 Hb_000045_080 Hb_000045_080 Hb_173107_020--Hb_000045_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.113065 16.4224 3.52867 22.4733 0.0533495 0.0620638
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0313493 0.0493266 0 3.1898 6.50031

CAGE analysis