Hb_000497_170

Information

Type -
Description -
Location Contig497: 165602-166165
Sequence    

Annotation

kegg
ID pop:POPTR_0003s15860g
description POPTRDRAFT_554663; hypothetical protein
nr
ID XP_012088682.1
description PREDICTED: uncharacterized protein LOC105647275 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JKC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23071 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000497_170 0.0 - - PREDICTED: uncharacterized protein LOC105647275 [Jatropha curcas]
2 Hb_103541_010 0.1279044984 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
3 Hb_001587_220 0.131110671 - - receptor protein kinase, putative [Ricinus communis]
4 Hb_000090_020 0.1320898154 - - acyltransferase, putative [Ricinus communis]
5 Hb_000638_180 0.1369593378 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
6 Hb_012553_030 0.1415991124 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
7 Hb_000732_100 0.1433718902 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
8 Hb_015884_010 0.1437441286 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
9 Hb_050898_010 0.1466419704 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
10 Hb_002431_090 0.1496952059 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000537_090 0.1511209405 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000692_230 0.155958269 - - phospholipase d delta, putative [Ricinus communis]
13 Hb_000714_070 0.1572608921 transcription factor TF Family: LOB hypothetical protein JCGZ_14754 [Jatropha curcas]
14 Hb_005892_010 0.15969641 - - PREDICTED: uncharacterized protein LOC105632168 [Jatropha curcas]
15 Hb_003939_090 0.1600027912 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
16 Hb_001016_040 0.1625027707 transcription factor TF Family: Orphans PREDICTED: histidine kinase 1 isoform X1 [Jatropha curcas]
17 Hb_183209_020 0.1626627303 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
18 Hb_000816_050 0.1637007116 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
19 Hb_000702_040 0.1665095627 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
20 Hb_000468_050 0.1669340206 - - -

Gene co-expression network

sample Hb_000497_170 Hb_000497_170 Hb_103541_010 Hb_103541_010 Hb_000497_170--Hb_103541_010 Hb_001587_220 Hb_001587_220 Hb_000497_170--Hb_001587_220 Hb_000090_020 Hb_000090_020 Hb_000497_170--Hb_000090_020 Hb_000638_180 Hb_000638_180 Hb_000497_170--Hb_000638_180 Hb_012553_030 Hb_012553_030 Hb_000497_170--Hb_012553_030 Hb_000732_100 Hb_000732_100 Hb_000497_170--Hb_000732_100 Hb_103541_010--Hb_000090_020 Hb_103541_010--Hb_012553_030 Hb_050898_010 Hb_050898_010 Hb_103541_010--Hb_050898_010 Hb_183209_020 Hb_183209_020 Hb_103541_010--Hb_183209_020 Hb_000537_090 Hb_000537_090 Hb_103541_010--Hb_000537_090 Hb_002598_020 Hb_002598_020 Hb_103541_010--Hb_002598_020 Hb_006573_060 Hb_006573_060 Hb_001587_220--Hb_006573_060 Hb_000702_040 Hb_000702_040 Hb_001587_220--Hb_000702_040 Hb_005892_010 Hb_005892_010 Hb_001587_220--Hb_005892_010 Hb_011101_010 Hb_011101_010 Hb_001587_220--Hb_011101_010 Hb_004586_230 Hb_004586_230 Hb_001587_220--Hb_004586_230 Hb_000137_030 Hb_000137_030 Hb_001587_220--Hb_000137_030 Hb_000090_020--Hb_012553_030 Hb_000090_020--Hb_002598_020 Hb_000090_020--Hb_000537_090 Hb_000090_020--Hb_000732_100 Hb_001318_230 Hb_001318_230 Hb_000090_020--Hb_001318_230 Hb_000638_180--Hb_000732_100 Hb_114733_010 Hb_114733_010 Hb_000638_180--Hb_114733_010 Hb_007292_050 Hb_007292_050 Hb_000638_180--Hb_007292_050 Hb_004241_200 Hb_004241_200 Hb_000638_180--Hb_004241_200 Hb_097634_010 Hb_097634_010 Hb_000638_180--Hb_097634_010 Hb_000742_260 Hb_000742_260 Hb_000638_180--Hb_000742_260 Hb_000468_050 Hb_000468_050 Hb_012553_030--Hb_000468_050 Hb_002592_070 Hb_002592_070 Hb_012553_030--Hb_002592_070 Hb_015884_010 Hb_015884_010 Hb_012553_030--Hb_015884_010 Hb_009225_070 Hb_009225_070 Hb_012553_030--Hb_009225_070 Hb_000732_100--Hb_000537_090 Hb_000732_100--Hb_001318_230 Hb_000732_100--Hb_114733_010 Hb_001269_530 Hb_001269_530 Hb_000732_100--Hb_001269_530 Hb_173107_020 Hb_173107_020 Hb_000732_100--Hb_173107_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.77327 0.525818 3.82855 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0871225 0.150909 0.789149 0.667374

CAGE analysis