Hb_138743_010

Information

Type -
Description -
Location Contig138743: 2175-4112
Sequence    

Annotation

kegg
ID pop:POPTR_0017s06310g
description hypothetical protein
nr
ID KDP42828.1
description hypothetical protein JCGZ_23770 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L6I7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23770 PE=3 SV=1
Gene Ontology
ID GO:0016301
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_138743_010 0.0 - - hypothetical protein JCGZ_23770 [Jatropha curcas]
2 Hb_000007_470 0.1702316582 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
3 Hb_003906_150 0.1952250082 - - peptidoglycan-binding LysM domain-containing family protein, partial [Populus trichocarpa]
4 Hb_168031_010 0.2003709575 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6 [Jatropha curcas]
5 Hb_002116_020 0.2030520428 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 35 [Jatropha curcas]
6 Hb_006590_040 0.2060379111 - - amino acid permease, putative [Ricinus communis]
7 Hb_111985_090 0.2111283646 - - hypothetical protein RCOM_1595950 [Ricinus communis]
8 Hb_003952_080 0.2139399986 - - zinc finger protein, putative [Ricinus communis]
9 Hb_005054_010 0.2141592764 - - amino acid transporter, putative [Ricinus communis]
10 Hb_008566_070 0.2145312262 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000604_050 0.2149384138 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
12 Hb_002411_070 0.2159442217 - - PREDICTED: WAT1-related protein At5g07050 [Jatropha curcas]
13 Hb_000373_110 0.2187316057 - - Nodulin, putative [Ricinus communis]
14 Hb_002874_160 0.2194896366 - - conserved hypothetical protein [Ricinus communis]
15 Hb_008200_010 0.2209788725 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
16 Hb_093084_020 0.2219401716 - - PREDICTED: lysM domain receptor-like kinase 3 [Populus euphratica]
17 Hb_004125_080 0.2224689359 - - PREDICTED: dCTP pyrophosphatase 1-like [Populus euphratica]
18 Hb_002374_070 0.2244433542 - - amino acid transporter, putative [Ricinus communis]
19 Hb_103149_010 0.2256942286 - - hypothetical protein CISIN_1g0397312mg, partial [Citrus sinensis]
20 Hb_000007_020 0.2299703007 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_138743_010 Hb_138743_010 Hb_000007_470 Hb_000007_470 Hb_138743_010--Hb_000007_470 Hb_003906_150 Hb_003906_150 Hb_138743_010--Hb_003906_150 Hb_168031_010 Hb_168031_010 Hb_138743_010--Hb_168031_010 Hb_002116_020 Hb_002116_020 Hb_138743_010--Hb_002116_020 Hb_006590_040 Hb_006590_040 Hb_138743_010--Hb_006590_040 Hb_111985_090 Hb_111985_090 Hb_138743_010--Hb_111985_090 Hb_000007_020 Hb_000007_020 Hb_000007_470--Hb_000007_020 Hb_000201_050 Hb_000201_050 Hb_000007_470--Hb_000201_050 Hb_000227_350 Hb_000227_350 Hb_000007_470--Hb_000227_350 Hb_021443_010 Hb_021443_010 Hb_000007_470--Hb_021443_010 Hb_003711_050 Hb_003711_050 Hb_000007_470--Hb_003711_050 Hb_000007_470--Hb_111985_090 Hb_000604_050 Hb_000604_050 Hb_003906_150--Hb_000604_050 Hb_001318_180 Hb_001318_180 Hb_003906_150--Hb_001318_180 Hb_008566_070 Hb_008566_070 Hb_003906_150--Hb_008566_070 Hb_003906_150--Hb_111985_090 Hb_004007_190 Hb_004007_190 Hb_003906_150--Hb_004007_190 Hb_000983_110 Hb_000983_110 Hb_003906_150--Hb_000983_110 Hb_168031_010--Hb_002116_020 Hb_168031_010--Hb_006590_040 Hb_000373_110 Hb_000373_110 Hb_168031_010--Hb_000373_110 Hb_002411_070 Hb_002411_070 Hb_168031_010--Hb_002411_070 Hb_005054_010 Hb_005054_010 Hb_168031_010--Hb_005054_010 Hb_004125_080 Hb_004125_080 Hb_168031_010--Hb_004125_080 Hb_002116_020--Hb_006590_040 Hb_002116_020--Hb_004125_080 Hb_002116_020--Hb_005054_010 Hb_002116_020--Hb_002411_070 Hb_002116_020--Hb_000373_110 Hb_006590_040--Hb_004125_080 Hb_008200_010 Hb_008200_010 Hb_006590_040--Hb_008200_010 Hb_006590_040--Hb_002411_070 Hb_002374_070 Hb_002374_070 Hb_006590_040--Hb_002374_070 Hb_111985_090--Hb_008566_070 Hb_111985_090--Hb_006590_040 Hb_111985_090--Hb_005054_010 Hb_111985_090--Hb_002116_020 Hb_005643_080 Hb_005643_080 Hb_111985_090--Hb_005643_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0192429 0.583297 0.0295739 0.984632 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0439918 0 0.064139 0 0.0713315

CAGE analysis