Hb_132381_010

Information

Type -
Description -
Location Contig132381: 373-705
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID Q05091
description Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0003824
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09297: 364-651
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_132381_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_031984_020 0.0756518871 - - conserved hypothetical protein [Ricinus communis]
3 Hb_015175_070 0.0924950527 - - cysteine protease, putative [Ricinus communis]
4 Hb_000531_030 0.0954705041 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002471_130 0.0961863328 - - PREDICTED: probable transmembrane ascorbate ferrireductase 3 [Jatropha curcas]
6 Hb_005295_030 0.0972108941 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
7 Hb_004899_230 0.0994802351 - - Indole-3-acetic acid-induced protein ARG7, putative [Ricinus communis]
8 Hb_004162_200 0.101200043 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
9 Hb_006922_120 0.1025564108 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
10 Hb_006977_010 0.1033126041 - - unnamed protein product [Vitis vinifera]
11 Hb_002092_060 0.1049068323 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000336_120 0.1049529663 - - PREDICTED: mavicyanin [Populus euphratica]
13 Hb_005440_040 0.1063305974 - - PREDICTED: microtubule-associated protein 70-5 [Jatropha curcas]
14 Hb_005116_150 0.1080341682 - - PREDICTED: cyclin-P3-1 isoform X2 [Jatropha curcas]
15 Hb_007113_060 0.1085829986 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
16 Hb_000408_060 0.1094587985 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
17 Hb_009151_010 0.1098756873 - - Peroxidase 3 [Morus notabilis]
18 Hb_002783_100 0.1100969809 - - Zeamatin precursor, putative [Ricinus communis]
19 Hb_002311_030 0.1113433845 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000964_040 0.1123254038 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_132381_010 Hb_132381_010 Hb_031984_020 Hb_031984_020 Hb_132381_010--Hb_031984_020 Hb_015175_070 Hb_015175_070 Hb_132381_010--Hb_015175_070 Hb_000531_030 Hb_000531_030 Hb_132381_010--Hb_000531_030 Hb_002471_130 Hb_002471_130 Hb_132381_010--Hb_002471_130 Hb_005295_030 Hb_005295_030 Hb_132381_010--Hb_005295_030 Hb_004899_230 Hb_004899_230 Hb_132381_010--Hb_004899_230 Hb_031984_020--Hb_002471_130 Hb_009151_010 Hb_009151_010 Hb_031984_020--Hb_009151_010 Hb_007113_060 Hb_007113_060 Hb_031984_020--Hb_007113_060 Hb_006922_120 Hb_006922_120 Hb_031984_020--Hb_006922_120 Hb_053264_010 Hb_053264_010 Hb_031984_020--Hb_053264_010 Hb_002092_060 Hb_002092_060 Hb_015175_070--Hb_002092_060 Hb_000336_120 Hb_000336_120 Hb_015175_070--Hb_000336_120 Hb_000310_050 Hb_000310_050 Hb_015175_070--Hb_000310_050 Hb_002309_020 Hb_002309_020 Hb_015175_070--Hb_002309_020 Hb_015175_070--Hb_005295_030 Hb_001349_040 Hb_001349_040 Hb_015175_070--Hb_001349_040 Hb_001104_060 Hb_001104_060 Hb_000531_030--Hb_001104_060 Hb_005440_040 Hb_005440_040 Hb_000531_030--Hb_005440_040 Hb_000227_360 Hb_000227_360 Hb_000531_030--Hb_000227_360 Hb_000531_030--Hb_009151_010 Hb_001456_030 Hb_001456_030 Hb_000531_030--Hb_001456_030 Hb_005116_150 Hb_005116_150 Hb_000531_030--Hb_005116_150 Hb_002471_130--Hb_009151_010 Hb_000103_450 Hb_000103_450 Hb_002471_130--Hb_000103_450 Hb_002471_130--Hb_053264_010 Hb_009783_010 Hb_009783_010 Hb_002471_130--Hb_009783_010 Hb_002471_130--Hb_006922_120 Hb_005295_030--Hb_002092_060 Hb_006977_010 Hb_006977_010 Hb_005295_030--Hb_006977_010 Hb_004162_200 Hb_004162_200 Hb_005295_030--Hb_004162_200 Hb_005295_030--Hb_002309_020 Hb_005295_030--Hb_004899_230 Hb_000005_290 Hb_000005_290 Hb_004899_230--Hb_000005_290 Hb_002276_080 Hb_002276_080 Hb_004899_230--Hb_002276_080 Hb_029883_010 Hb_029883_010 Hb_004899_230--Hb_029883_010 Hb_004899_230--Hb_002092_060 Hb_004899_230--Hb_006977_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.689542 6.75564 26.3683 0.498068 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.207153 8.23569

CAGE analysis