Hb_112203_010

Information

Type -
Description -
Location Contig112203: 7088-7911
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_112203_010 0.0 - - -
2 Hb_008692_010 0.1620062898 - - putative polyol transported protein 2 [Hevea brasiliensis]
3 Hb_001504_220 0.1843950262 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_005389_190 0.187359763 - - glutamate receptor 2 plant, putative [Ricinus communis]
5 Hb_025526_010 0.1898374447 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104452086 [Eucalyptus grandis]
6 Hb_006096_020 0.1935046782 - - Os06g0343500 [Oryza sativa Japonica Group]
7 Hb_056101_010 0.1962197973 - - hypothetical protein POPTR_0391s00200g [Populus trichocarpa]
8 Hb_002960_170 0.2011999169 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Jatropha curcas]
9 Hb_000101_360 0.203985631 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
10 Hb_132515_010 0.2063864096 - - phosphoprotein phosphatase, putative [Ricinus communis]
11 Hb_000816_020 0.2074923028 desease resistance Gene Name: NB-ARC unnamed protein product [Coffea canephora]
12 Hb_001900_130 0.207883434 - - PREDICTED: uncharacterized protein LOC105632667 [Jatropha curcas]
13 Hb_000177_120 0.209805968 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
14 Hb_018212_020 0.2112200023 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
15 Hb_008768_010 0.2119357593 - - PREDICTED: equilibrative nucleotide transporter 8 isoform X1 [Jatropha curcas]
16 Hb_006651_010 0.2168145347 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
17 Hb_002555_030 0.2168835226 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Malus domestica]
18 Hb_003060_080 0.2169803902 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
19 Hb_007894_260 0.2174693811 - - receptor protein kinase, putative [Ricinus communis]
20 Hb_014037_010 0.219593621 - - PREDICTED: uncharacterized protein LOC105641871 [Jatropha curcas]

Gene co-expression network

sample Hb_112203_010 Hb_112203_010 Hb_008692_010 Hb_008692_010 Hb_112203_010--Hb_008692_010 Hb_001504_220 Hb_001504_220 Hb_112203_010--Hb_001504_220 Hb_005389_190 Hb_005389_190 Hb_112203_010--Hb_005389_190 Hb_025526_010 Hb_025526_010 Hb_112203_010--Hb_025526_010 Hb_006096_020 Hb_006096_020 Hb_112203_010--Hb_006096_020 Hb_056101_010 Hb_056101_010 Hb_112203_010--Hb_056101_010 Hb_018591_050 Hb_018591_050 Hb_008692_010--Hb_018591_050 Hb_008692_010--Hb_025526_010 Hb_000740_130 Hb_000740_130 Hb_008692_010--Hb_000740_130 Hb_007894_260 Hb_007894_260 Hb_008692_010--Hb_007894_260 Hb_000101_360 Hb_000101_360 Hb_008692_010--Hb_000101_360 Hb_003060_080 Hb_003060_080 Hb_008692_010--Hb_003060_080 Hb_012553_020 Hb_012553_020 Hb_001504_220--Hb_012553_020 Hb_014037_010 Hb_014037_010 Hb_001504_220--Hb_014037_010 Hb_011200_020 Hb_011200_020 Hb_001504_220--Hb_011200_020 Hb_003399_030 Hb_003399_030 Hb_001504_220--Hb_003399_030 Hb_000152_810 Hb_000152_810 Hb_001504_220--Hb_000152_810 Hb_011063_060 Hb_011063_060 Hb_001504_220--Hb_011063_060 Hb_003517_010 Hb_003517_010 Hb_005389_190--Hb_003517_010 Hb_004143_120 Hb_004143_120 Hb_005389_190--Hb_004143_120 Hb_000343_100 Hb_000343_100 Hb_005389_190--Hb_000343_100 Hb_144004_010 Hb_144004_010 Hb_005389_190--Hb_144004_010 Hb_002006_140 Hb_002006_140 Hb_005389_190--Hb_002006_140 Hb_006788_150 Hb_006788_150 Hb_025526_010--Hb_006788_150 Hb_025526_010--Hb_056101_010 Hb_000661_230 Hb_000661_230 Hb_025526_010--Hb_000661_230 Hb_000422_020 Hb_000422_020 Hb_025526_010--Hb_000422_020 Hb_004881_060 Hb_004881_060 Hb_025526_010--Hb_004881_060 Hb_025526_010--Hb_003060_080 Hb_000816_020 Hb_000816_020 Hb_006096_020--Hb_000816_020 Hb_001677_230 Hb_001677_230 Hb_006096_020--Hb_001677_230 Hb_012023_010 Hb_012023_010 Hb_006096_020--Hb_012023_010 Hb_001619_010 Hb_001619_010 Hb_006096_020--Hb_001619_010 Hb_082683_010 Hb_082683_010 Hb_006096_020--Hb_082683_010 Hb_000059_080 Hb_000059_080 Hb_006096_020--Hb_000059_080 Hb_000575_110 Hb_000575_110 Hb_056101_010--Hb_000575_110 Hb_056101_010--Hb_004881_060 Hb_056101_010--Hb_000422_020 Hb_005116_010 Hb_005116_010 Hb_056101_010--Hb_005116_010 Hb_009486_100 Hb_009486_100 Hb_056101_010--Hb_009486_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.90609 0.185933 0.891746 0.224594 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.524527 0.411991 0.224334 9.94206 3.20828

CAGE analysis