Hb_000152_810

Information

Type -
Description -
Location Contig152: 645762-650457
Sequence    

Annotation

kegg
ID rcu:RCOM_1500640
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_012090763.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
swissprot
ID Q9LP24
description Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1
trembl
ID A0A067JI00
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26264 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13057: 649771-650428
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_810 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
2 Hb_009545_010 0.1388021713 transcription factor TF Family: GNAT Acetyltransferase [Medicago truncatula]
3 Hb_001504_220 0.1421237018 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_055305_010 0.1534979453 - - Disease resistance protein RFL1, putative [Ricinus communis]
5 Hb_004855_050 0.153633894 - - hypothetical protein POPTR_0016s12140g [Populus trichocarpa]
6 Hb_142332_010 0.1714354359 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
7 Hb_032631_050 0.1734953528 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
8 Hb_012553_020 0.1750620012 - - hypothetical protein JCGZ_09282 [Jatropha curcas]
9 Hb_002750_010 0.1803502814 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
10 Hb_003399_030 0.1834485654 - - PREDICTED: isoflavone 2'-hydroxylase-like [Jatropha curcas]
11 Hb_000984_080 0.1846023766 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
12 Hb_011200_020 0.1851524292 - - aldo-keto reductase, putative [Ricinus communis]
13 Hb_003987_030 0.1870927859 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
14 Hb_001838_050 0.1890248199 - - hypothetical protein B456_007G218500 [Gossypium raimondii]
15 Hb_001135_290 0.1908679162 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
16 Hb_001405_100 0.1914812876 - - PREDICTED: lysM domain receptor-like kinase 4 [Jatropha curcas]
17 Hb_000098_310 0.193203621 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
18 Hb_004657_040 0.1949511025 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
19 Hb_001678_030 0.2019405895 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
20 Hb_008695_130 0.2046377265 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000152_810 Hb_000152_810 Hb_009545_010 Hb_009545_010 Hb_000152_810--Hb_009545_010 Hb_001504_220 Hb_001504_220 Hb_000152_810--Hb_001504_220 Hb_055305_010 Hb_055305_010 Hb_000152_810--Hb_055305_010 Hb_004855_050 Hb_004855_050 Hb_000152_810--Hb_004855_050 Hb_142332_010 Hb_142332_010 Hb_000152_810--Hb_142332_010 Hb_032631_050 Hb_032631_050 Hb_000152_810--Hb_032631_050 Hb_009545_010--Hb_001504_220 Hb_002182_050 Hb_002182_050 Hb_009545_010--Hb_002182_050 Hb_050203_010 Hb_050203_010 Hb_009545_010--Hb_050203_010 Hb_001004_100 Hb_001004_100 Hb_009545_010--Hb_001004_100 Hb_000984_080 Hb_000984_080 Hb_009545_010--Hb_000984_080 Hb_012553_020 Hb_012553_020 Hb_001504_220--Hb_012553_020 Hb_014037_010 Hb_014037_010 Hb_001504_220--Hb_014037_010 Hb_011200_020 Hb_011200_020 Hb_001504_220--Hb_011200_020 Hb_003399_030 Hb_003399_030 Hb_001504_220--Hb_003399_030 Hb_011063_060 Hb_011063_060 Hb_001504_220--Hb_011063_060 Hb_002551_090 Hb_002551_090 Hb_055305_010--Hb_002551_090 Hb_055305_010--Hb_142332_010 Hb_001838_050 Hb_001838_050 Hb_055305_010--Hb_001838_050 Hb_002750_010 Hb_002750_010 Hb_055305_010--Hb_002750_010 Hb_000616_050 Hb_000616_050 Hb_055305_010--Hb_000616_050 Hb_001454_410 Hb_001454_410 Hb_055305_010--Hb_001454_410 Hb_004855_050--Hb_012553_020 Hb_007875_070 Hb_007875_070 Hb_004855_050--Hb_007875_070 Hb_004855_050--Hb_000984_080 Hb_000976_020 Hb_000976_020 Hb_004855_050--Hb_000976_020 Hb_008225_080 Hb_008225_080 Hb_004855_050--Hb_008225_080 Hb_000189_260 Hb_000189_260 Hb_004855_050--Hb_000189_260 Hb_142332_010--Hb_001838_050 Hb_111582_010 Hb_111582_010 Hb_142332_010--Hb_111582_010 Hb_002150_010 Hb_002150_010 Hb_142332_010--Hb_002150_010 Hb_001678_030 Hb_001678_030 Hb_142332_010--Hb_001678_030 Hb_001405_100 Hb_001405_100 Hb_142332_010--Hb_001405_100 Hb_000649_030 Hb_000649_030 Hb_142332_010--Hb_000649_030 Hb_000421_270 Hb_000421_270 Hb_032631_050--Hb_000421_270 Hb_001348_210 Hb_001348_210 Hb_032631_050--Hb_001348_210 Hb_032631_050--Hb_011200_020 Hb_000963_200 Hb_000963_200 Hb_032631_050--Hb_000963_200 Hb_002025_350 Hb_002025_350 Hb_032631_050--Hb_002025_350 Hb_029584_090 Hb_029584_090 Hb_032631_050--Hb_029584_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0203056 1.21815 0.341015 0.822652 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.365373 0.202649 4.16613 0.225322

CAGE analysis