Hb_018591_050

Information

Type -
Description -
Location Contig18591: 82325-84673
Sequence    

Annotation

kegg
ID pop:POPTR_0006s09010g
description POPTRDRAFT_762397; hypothetical protein
nr
ID XP_012074988.1
description PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTT8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09118 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018591_050 0.0 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
2 Hb_000077_330 0.1053407145 - - PREDICTED: bifunctional epoxide hydrolase 2-like [Jatropha curcas]
3 Hb_008692_010 0.109455842 - - putative polyol transported protein 2 [Hevea brasiliensis]
4 Hb_025526_010 0.129619386 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104452086 [Eucalyptus grandis]
5 Hb_007894_260 0.133900645 - - receptor protein kinase, putative [Ricinus communis]
6 Hb_000412_060 0.1345574509 - - hypothetical protein JCGZ_18814 [Jatropha curcas]
7 Hb_003060_080 0.1401353913 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
8 Hb_110218_010 0.1442858053 - - PREDICTED: uncharacterized protein LOC104428128 [Eucalyptus grandis]
9 Hb_006788_150 0.1458516919 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001649_040 0.1519301764 - - Polygalacturonase precursor, putative [Ricinus communis]
11 Hb_000740_130 0.1543883554 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
12 Hb_004881_060 0.1564147875 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
13 Hb_006569_110 0.158362536 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000010_200 0.1588493295 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
15 Hb_012553_020 0.1591886103 - - hypothetical protein JCGZ_09282 [Jatropha curcas]
16 Hb_000101_360 0.160424558 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
17 Hb_003900_050 0.1614063 transcription factor TF Family: HSF Heat Stress Transcription Factor family protein [Populus trichocarpa]
18 Hb_006938_010 0.1620504573 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
19 Hb_003399_030 0.1633450288 - - PREDICTED: isoflavone 2'-hydroxylase-like [Jatropha curcas]
20 Hb_056101_010 0.1636670891 - - hypothetical protein POPTR_0391s00200g [Populus trichocarpa]

Gene co-expression network

sample Hb_018591_050 Hb_018591_050 Hb_000077_330 Hb_000077_330 Hb_018591_050--Hb_000077_330 Hb_008692_010 Hb_008692_010 Hb_018591_050--Hb_008692_010 Hb_025526_010 Hb_025526_010 Hb_018591_050--Hb_025526_010 Hb_007894_260 Hb_007894_260 Hb_018591_050--Hb_007894_260 Hb_000412_060 Hb_000412_060 Hb_018591_050--Hb_000412_060 Hb_003060_080 Hb_003060_080 Hb_018591_050--Hb_003060_080 Hb_032050_050 Hb_032050_050 Hb_000077_330--Hb_032050_050 Hb_000077_330--Hb_008692_010 Hb_001649_040 Hb_001649_040 Hb_000077_330--Hb_001649_040 Hb_031042_030 Hb_031042_030 Hb_000077_330--Hb_031042_030 Hb_012553_020 Hb_012553_020 Hb_000077_330--Hb_012553_020 Hb_008692_010--Hb_025526_010 Hb_000740_130 Hb_000740_130 Hb_008692_010--Hb_000740_130 Hb_008692_010--Hb_007894_260 Hb_000101_360 Hb_000101_360 Hb_008692_010--Hb_000101_360 Hb_008692_010--Hb_003060_080 Hb_006788_150 Hb_006788_150 Hb_025526_010--Hb_006788_150 Hb_056101_010 Hb_056101_010 Hb_025526_010--Hb_056101_010 Hb_000661_230 Hb_000661_230 Hb_025526_010--Hb_000661_230 Hb_000422_020 Hb_000422_020 Hb_025526_010--Hb_000422_020 Hb_004881_060 Hb_004881_060 Hb_025526_010--Hb_004881_060 Hb_025526_010--Hb_003060_080 Hb_006569_110 Hb_006569_110 Hb_007894_260--Hb_006569_110 Hb_006938_010 Hb_006938_010 Hb_007894_260--Hb_006938_010 Hb_007894_260--Hb_003060_080 Hb_000010_200 Hb_000010_200 Hb_007894_260--Hb_000010_200 Hb_000381_030 Hb_000381_030 Hb_007894_260--Hb_000381_030 Hb_000920_360 Hb_000920_360 Hb_007894_260--Hb_000920_360 Hb_000412_060--Hb_006788_150 Hb_000412_060--Hb_025526_010 Hb_000412_060--Hb_007894_260 Hb_005116_010 Hb_005116_010 Hb_000412_060--Hb_005116_010 Hb_000412_060--Hb_000077_330 Hb_003060_080--Hb_006569_110 Hb_006970_100 Hb_006970_100 Hb_003060_080--Hb_006970_100 Hb_006651_010 Hb_006651_010 Hb_003060_080--Hb_006651_010 Hb_003060_080--Hb_006938_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.060963 0.645823 0.131684 0.206123 0 0.0470579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.027928 0 0 2.04975 0.369165

CAGE analysis