Hb_106136_010

Information

Type -
Description -
Location Contig106136: 3-1035
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_106136_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_001071_060 0.1496220022 - - Trehalose phosphatase/synthase 5 isoform 1 [Theobroma cacao]
3 Hb_004531_110 0.1572234826 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
4 Hb_001832_210 0.1614043876 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
5 Hb_002119_070 0.1614589413 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
6 Hb_000197_230 0.1617153026 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
7 Hb_010605_010 0.1638740995 desease resistance Gene Name: NB-ARC Disease resistance protein RPM1, putative [Ricinus communis]
8 Hb_136033_010 0.1667848253 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Gossypium raimondii]
9 Hb_004409_030 0.1697138069 - - Glutamine synthetase 1,4 [Theobroma cacao]
10 Hb_160405_010 0.172103705 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
11 Hb_048643_010 0.1775580447 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
12 Hb_000325_010 0.1820834577 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]
13 Hb_001898_020 0.187147257 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
14 Hb_005016_020 0.1880310811 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
15 Hb_005288_210 0.189538067 - - hypothetical protein VITISV_017217 [Vitis vinifera]
16 Hb_000362_050 0.1899147356 transcription factor TF Family: NOZZLE PREDICTED: uncharacterized protein LOC105635737 [Jatropha curcas]
17 Hb_000997_340 0.1900372751 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
18 Hb_001016_040 0.1921123633 transcription factor TF Family: Orphans PREDICTED: histidine kinase 1 isoform X1 [Jatropha curcas]
19 Hb_000483_130 0.1922372417 - - PREDICTED: uncharacterized protein LOC105644062 isoform X1 [Jatropha curcas]
20 Hb_000000_110 0.1924141238 - - hypothetical protein CISIN_1g0027772mg, partial [Citrus sinensis]

Gene co-expression network

sample Hb_106136_010 Hb_106136_010 Hb_001071_060 Hb_001071_060 Hb_106136_010--Hb_001071_060 Hb_004531_110 Hb_004531_110 Hb_106136_010--Hb_004531_110 Hb_001832_210 Hb_001832_210 Hb_106136_010--Hb_001832_210 Hb_002119_070 Hb_002119_070 Hb_106136_010--Hb_002119_070 Hb_000197_230 Hb_000197_230 Hb_106136_010--Hb_000197_230 Hb_010605_010 Hb_010605_010 Hb_106136_010--Hb_010605_010 Hb_001071_060--Hb_001832_210 Hb_001071_060--Hb_000197_230 Hb_001071_060--Hb_004531_110 Hb_064047_010 Hb_064047_010 Hb_001071_060--Hb_064047_010 Hb_000778_020 Hb_000778_020 Hb_001071_060--Hb_000778_020 Hb_002324_040 Hb_002324_040 Hb_001071_060--Hb_002324_040 Hb_004531_110--Hb_001832_210 Hb_048643_010 Hb_048643_010 Hb_004531_110--Hb_048643_010 Hb_004531_110--Hb_002119_070 Hb_001148_040 Hb_001148_040 Hb_004531_110--Hb_001148_040 Hb_002928_120 Hb_002928_120 Hb_004531_110--Hb_002928_120 Hb_000000_110 Hb_000000_110 Hb_001832_210--Hb_000000_110 Hb_001832_210--Hb_000197_230 Hb_000997_340 Hb_000997_340 Hb_001832_210--Hb_000997_340 Hb_000220_080 Hb_000220_080 Hb_001832_210--Hb_000220_080 Hb_000085_380 Hb_000085_380 Hb_001832_210--Hb_000085_380 Hb_002119_070--Hb_010605_010 Hb_000362_050 Hb_000362_050 Hb_002119_070--Hb_000362_050 Hb_002119_070--Hb_002928_120 Hb_002119_070--Hb_001071_060 Hb_151706_010 Hb_151706_010 Hb_002119_070--Hb_151706_010 Hb_000197_230--Hb_010605_010 Hb_002833_020 Hb_002833_020 Hb_000197_230--Hb_002833_020 Hb_000100_210 Hb_000100_210 Hb_000197_230--Hb_000100_210 Hb_001391_100 Hb_001391_100 Hb_000197_230--Hb_001391_100 Hb_163658_010 Hb_163658_010 Hb_010605_010--Hb_163658_010 Hb_001408_150 Hb_001408_150 Hb_010605_010--Hb_001408_150 Hb_010605_010--Hb_001071_060 Hb_010605_010--Hb_001391_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.355656 2.60645 0.471365 3.51021 0.288616 0.630861
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.56761 1.16821

CAGE analysis